Pre_GI: BLASTP Hits

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Query: NC_016582:7946000:7964090 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 7964090, End: 7964749, Length: 660

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009659:997779:101453610145361015186651Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein4e-59227
NC_012803:1753138:176025317602531760966714Micrococcus luteus NCTC 2665, complete genomehypothetical protein3e-44178
NC_014550:3263783:326900532690053269751747Arthrobacter arilaitensis Re117, complete genomehypothetical protein2e-43175
NC_015578:3914189:391884739188473919647801Treponema primitia ZAS-2 chromosome, complete genomeserine/threonine kinase3e-37154
NC_018866:925704:932484932484932900417Dehalobacter sp. DCA chromosome, complete genomeserine/threonine kinase6e-26117
NC_018867:993903:997105997105997521417Dehalobacter sp. CF chromosome, complete genomeserine/threonine kinase6e-26117
NC_015690:3477573:347757334775733478433861Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative transcriptional regulator3e-24111
NC_008576:1413778:141721014172101418058849Magnetococcus sp. MC-1, complete genomeprotein of unknown function DUF3233e-24111
NC_015578:2428500:2440214244021424417641551Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein1e-23109
NC_018866:925704:930513930513930737225Dehalobacter sp. DCA chromosome, complete genomeserine/threonine kinase7e-23107
NC_015385:2050648:2054006205400620554901485Treponema succinifaciens DSM 2489 chromosome, complete genome2e-2099.4
NC_011884:2397248:2407435240743524108333399Cyanothece sp. PCC 7425, complete genomeprotein of unknown function DUF3239e-2097.1
NC_013440:3947493:395595939559593956942984Haliangium ochraceum DSM 14365, complete genomeprotein of unknown function DUF3239e-2096.7
NC_015177:2972701:299951929995193000352834Pedobacter saltans DSM 12145 chromosome, complete genomeprotein of unknown function DUF3231e-1996.3
NC_014364:667841:6854326854326866341203Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF3232e-1996.3
NC_007516:774489:800339800339801196858Synechococcus sp. CC9605, complete genomehypothetical protein2e-1995.5
NC_007355:729498:7294987294987313331836Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein3e-1995.5
NC_013501:1547508:1557127155712715585541428Rhodothermus marinus DSM 4252, complete genomeprotein of unknown function DUF3238e-1993.6
NC_011768:3385719:341806634180663418884819Desulfatibacillum alkenivorans AK-01, complete genomeprotein of unknown function DUF3239e-1993.6
NC_012912:242709:250617250617251480864Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF3233e-1892
NC_019972:145617:159658159658160473816Methanomethylovorans hollandica DSM 15978 plasmid pMETHO01,hypothetical protein4e-1891.7
NC_014041:4517999:452543045254304526383954Zunongwangia profunda SM-A87 chromosome, complete genomesulfatase-modifying factor4e-1891.3
NC_002967:2507993:2516835251683525184541620Treponema denticola ATCC 35405, complete genomehypothetical protein6e-1890.9
NC_018748:1443176:145860414586041459338735Emticicia oligotrophica DSM 17448 chromosome, complete genomeSulphatase-modifying factor protein7e-1890.5
NC_015690:5263108:527171952717195272516798Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein1e-1790.1
NC_008312:1600000:1619340161934016211931854Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase1e-1789.7
NC_019972:145617:1456171456171470051389Methanomethylovorans hollandica DSM 15978 plasmid pMETHO01,hypothetical protein2e-1789.4
NC_016935:5017317:502592750259275026439513Paenibacillus mucilaginosus 3016 chromosome, complete genome2e-1789.4
NC_015424:2316228:231868523186852319452768Aeromonas veronii B565 chromosome, complete genomehypothetical protein5e-1787.8
NC_002967:2507993:2518825251882525211432319Treponema denticola ATCC 35405, complete genomehypothetical protein1e-1686.7
NC_008312:723456:7338677338677357441878Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase1e-1583.6
NC_013730:3695674:371268337126833713549867Spirosoma linguale DSM 74, complete genomeprotein of unknown function DUF3231e-1583.2
NC_008312:6617951:6633517663351766361052589Trichodesmium erythraeum IMS101, complete genomeprotein of unknown function DUF3232e-1582.8
NC_008312:723456:7317607317607336251866Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase2e-1582.4
NC_017098:1409086:1412698141269814137591062Spirochaeta africana DSM 8902 chromosome, complete genomehypothetical protein6e-1580.9
NC_009523:1101214:111680911168091117564756Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein1e-1480.1
NC_008312:723456:7359707359707378831914Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase1e-1479.7
NC_011729:3955310:3964597396459739673742778Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein1e-1479.7
NC_014838:175939:183972183972184922951Pantoea sp. At-9b plasmid pPAT9B01, complete sequencehypothetical protein2e-1479.3
NC_008312:723456:7296567296567315181863Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase2e-1479
NC_007626:1863747:1869435186943518709371503Magnetospirillum magneticum AMB-1, complete genomeSulfatase modifying factor 2 precursor2e-1376.3
NC_019892:3366463:3367871336787133689231053Singulisphaera acidiphila DSM 18658 chromosome, complete genomehypothetical protein2e-1375.5
NC_006138:2630338:264828226482822648998717Desulfotalea psychrophila LSv54, complete genomehypothetical protein7e-1373.9
NC_011768:3385719:341639834163983417315918Desulfatibacillum alkenivorans AK-01, complete genomeprotein of unknown function DUF3231e-1273.6
NC_013173:1356526:1402477140247714040061530Desulfomicrobium baculatum DSM 4028, complete genomeserine/threonine protein kinase3e-1271.6
NC_013720:2898639:2898639289863928998291191Pirellula staleyi DSM 6068, complete genomeprotein of unknown function DUF3234e-1271.6
NC_013173:1356526:139611213961121396876765Desulfomicrobium baculatum DSM 4028, complete genomeprotein of unknown function DUF3237e-1270.9
NC_018876:996855:9995339995331000357825Methanolobus psychrophilus R15 chromosome, complete genomehypothetical protein2e-1169.3
NC_012982:1899973:1917663191766319199272265Hirschia baltica ATCC 49814, complete genomeprotein of unknown function DUF3231e-1066.2
NC_008536:33776:474264742648145720Solibacter usitatus Ellin6076, complete genomeprotein of unknown function DUF3232e-1065.9
NC_014355:3248386:326707132670713267985915Candidatus Nitrospira defluvii, complete genomehypothetical protein9e-1063.5
NC_008639:1462000:1476041147604114805194479Chlorobium phaeobacteroides DSM 266, complete genomeprotein of unknown function DUF3231e-0963.2
NC_013173:1356526:1379862137986213815291668Desulfomicrobium baculatum DSM 4028, complete genomeserine/threonine protein kinase2e-0962.8
NC_016510:2750354:2756623275662327579751353Flavobacterium columnare ATCC 49512 chromosome, complete genomegliding motility protein GldK3e-0858.5
NC_011770:3163480:319296531929653193819855Pseudomonas aeruginosa LESB58, complete genomePvdO1e-0757
NC_014355:3435343:343961634396163440473858Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-0756.6
NC_013173:1356526:139521413952141396044831Desulfomicrobium baculatum DSM 4028, complete genomeprotein of unknown function DUF3232e-0756.2
NC_015177:981552:986616986616987614999Pedobacter saltans DSM 12145 chromosome, complete genomeprotein of unknown function DUF3232e-0756.2
NC_015167:864525:8713628713628727021341Cellulophaga lytica DSM 7489 chromosome, complete genomegliding motility-associated lipoprotein GldK2e-0756.2
NC_008595:5168941:518374451837445184622879Mycobacterium avium 104, complete genomesulfatase-modifying factor 12e-0755.8
NC_014355:139324:159667159667160629963Candidatus Nitrospira defluvii, complete genomehypothetical protein3e-0755.5
NC_018721:1027396:1047203104720310485581356Psychroflexus torquis ATCC 700755 chromosome, complete genomegliding motility associated lipoprotein GldK7e-0753.9
NC_017904:4742775:478221447822144783104891Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein9e-0753.5
NC_013892:3745749:375739037573903758373984Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein9e-0753.5
NC_008571:3165143:3171854317185431732181365Gramella forsetii KT0803, complete genomegliding motility protein GldK1e-0653.5
NC_019902:498500:515992515992516876885Thioalkalivibrio nitratireducens DSM 14787, complete genomeprotein of unknown function DUF3231e-0653.5
NC_021150:2546000:255338825533882554128741Azotobacter vinelandii CA6, complete genomehypothetical protein2e-0653.1
NC_012560:2546000:255337625533762554116741Azotobacter vinelandii DJ, complete genomehypothetical protein2e-0653.1
NC_013421:478586:4969614969614984961536Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF3231e-0653.1
NC_012988:769981:824567824567825550984Methylobacterium extorquens DM4, complete genomesulfatase-modifying factor like protein1e-0653.1
NC_010172:798923:849779849779850762984Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF3231e-0653.1
NC_010172:573046:573046573046574023978Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF3232e-0652.8
NC_010511:7400255:742135074213507422273924Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein3e-0652
NC_014355:3248386:326610632661063267059954Candidatus Nitrospira defluvii, complete genomehypothetical protein3e-0652
NC_020133:5020500:504097150409715041852882Mycobacterium liflandii 128FXT, complete genomeFormylglycine-generating sulfatase enzyme4e-0651.6
NC_013889:216829:228850228850229731882Thioalkalivibrio sp. K90mix chromosome, complete genomeprotein of unknown function DUF3234e-0651.6
NC_012669:832555:837114837114838103990Beutenbergia cavernae DSM 12333, complete genomeprotein of unknown function DUF3235e-0651.2
NC_013410:1491000:1494582149458214972332652Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein7e-0650.8