Pre_GI: BLASTP Hits

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Query: NC_016582:7946000:7952288 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 7952288, End: 7953586, Length: 1299

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015671:874500:8980898980898994231335Cellvibrio gilvus ATCC 13127 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-90331
NC_015052:2383865:2388169238816923895091341Bifidobacterium longum subsp. infantis 157F, complete genomeABC transporter substrate-binding protein5e-82305
NC_017221:2268276:2284399228439922855711173Bifidobacterium longum subsp. longum KACC 91563 chromosome,ABC transporter substrate-binding protein9e-75281
NC_013093:2895511:2906250290625029075991350Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 14e-74278
NC_013721:1204566:1214195121419512156371443Gardnerella vaginalis 409-05, complete genomebacterial extracellular solute-binding protein1e-53210
NC_016582:7737930:7748351774835177497091359Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative substrate-binding transport lipoprotein4e-46185
NC_013093:2132284:2140041214004121413601320Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 14e-38159
NC_011593:391297:3971513971513985601410Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,family 1 extracellular solute-binding protein2e-31137
NC_017219:391100:3969663969663983541389Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative ABC transporter substrate binding component2e-31137
NC_013174:309943:3295333295333308551323Jonesia denitrificans DSM 20603, complete genomeextracellular solute-binding protein family 13e-28126
NC_013172:466300:4684394684394697731335Brachybacterium faecium DSM 4810, complete genomeABC-type sugar transport system, periplasmic component6e-28125
NC_015577:1462874:1468358146835814696891332Treponema azotonutricium ZAS-9 chromosome, complete genomeputative family 1 extracellular solute-binding protein1e-26121
NC_014246:1787154:1798378179837817996131236Mobiluncus curtisii ATCC 43063 chromosome, complete genomesugar ABC transporter substrate-binding protein2e-1997.4
NC_010407:1775227:1784339178433917856341296Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative substrate-binding transport6e-1995.9
NC_011567:2327870:2334876233487623362251350Anoxybacillus flavithermus WK1, complete genomeABC-type sugar transport system, periplasmic component4e-1892.8
NC_015675:2567000:2580950258095025822211272Mesorhizobium opportunistum WSM2075 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1790.5
NC_019973:2417000:2430787243078724320581272Mesorhizobium australicum WSM2073, complete genomeABC-type sugar transport system, periplasmic component3e-1790.1
NC_014923:2439197:2453772245377224550431272Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeextracellular solute-binding protein family 17e-1788.6
NC_014829:3741843:3753994375399437552951302Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeextracellular solute-binding protein family 11e-1688.2
NC_015732:773143:7933897933897946871299Spirochaeta caldaria DSM 7334 chromosome, complete genomeextracellular solute-binding protein family 11e-1584.7
NC_011653:1574415:1579050157905015803001251Thermosipho africanus TCF52B, complete genomelactose-binding protein1e-1481.3
NC_006322:2886404:2908934290893429102381305Bacillus licheniformis ATCC 14580, complete genomeAraN1e-1378.2
NC_014364:3500041:3506794350679435080321239Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 13e-1377
NC_015732:773143:7792277792277805101284Spirochaeta caldaria DSM 7334 chromosome, complete genomeextracellular solute-binding protein family 14e-1376.6
NC_017167:1088713:1097975109797510992851311Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1extracellular solute-binding protein4e-1376.3
NC_014206:1694330:1714328171432817156381311Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein9e-1375.1
NC_020291:6310000:6326586632658663278271242Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeABC-type sugar transport system, periplasmic component1e-1274.7
NC_012917:833721:8569088569088581731266Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeextracellular solute-binding protein family 12e-1273.6
NC_004547:913553:9385309385309397951266Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative sugar ABC transporter, periplasmic binding protein5e-1272.8
NC_014652:2323598:2330356233035623315821227Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 19e-1271.6
NC_013131:7945280:7972883797288379740971215Catenulispora acidiphila DSM 44928, complete genomeextracellular solute-binding protein family 11e-1171.6
NC_009437:475817:4947954947954960211227Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular solute-binding protein3e-1170.1
NC_014721:373607:3913783913783926041227Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeextracellular solute-binding protein family 13e-1170.1
NC_020134:1783000:1783007178300717843291323Clostridium stercorarium subsp. stercorarium DSM 8532, completeextracellular solute-binding protein, family 13e-1170.1
NC_015949:2101302:2106691210669121079171227Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomefamily 1 extracellular solute-binding protein3e-1170.1
NC_012034:438000:4587584587584599841227Anaerocellum thermophilum DSM 6725, complete genomeextracellular solute-binding protein family 13e-1170.1
NC_013421:1038500:1042630104263010438951266Pectobacterium wasabiae WPP163, complete genomeextracellular solute-binding protein family 14e-1169.7
NC_014392:412916:4339374339374351631227Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeextracellular solute-binding protein family 16e-1168.9
NC_014720:2420455:2437885243788524391111227Caldicellulosiruptor kronotskyensis 2002 chromosome, completeextracellular solute-binding protein family 13e-1067
NC_011899:86800:9030190301915361236Halothermothrix orenii H 168, complete genomeextracellular solute-binding protein family 16e-1065.9
NC_019673:2733327:2738550273855027398181269Saccharothrix espanaensis DSM 44229 complete genomeABC-type transporter, substrate-binding lipoprotein, family 11e-0965.1
NC_015848:3175692:3197808319780831991181311Mycobacterium canettii CIPT 140010059, complete genomeputative Sn-glycerol-3-phosphate-binding lipoprotein UGPB1e-0964.7
NC_019950:3139865:3162191316219131635011311Mycobacterium canettii CIPT 140060008 complete genomePutative Sn-glycerol-3-phosphate-binding lipoprotein UgpB1e-0964.7
NC_009328:1867971:1885183188518318865051323Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesugar ABC transporter sugar-binding protein1e-0964.7
NC_011886:404661:4213504213504226421293Arthrobacter chlorophenolicus A6, complete genomeextracellular solute-binding protein family 11e-0964.7
NC_010407:3174470:3193095319309531944141320Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative sugar-binding transport lipoprotein2e-0964.3
NC_020995:3300751:3300751330075133020461296Enterococcus casseliflavus EC20, complete genomehypothetical protein3e-0963.2
NC_015690:7785875:7785875778587577872091335Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-0962.4
NC_013526:439813:4495644495644510061443Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeextracellular solute-binding protein family 12e-0861.2
NC_010572:2843589:2863797286379728650441248Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ABC transporter substrate-binding protein1e-0861.2
NC_017218:31247:4968249682510551374Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeABC transporter substrate-binding protein2e-0860.8
NC_016641:1984206:1986876198687619881261251Paenibacillus terrae HPL-003 chromosome, complete genomesugar ABC transporter periplasmic protein2e-0860.8
NC_014915:1909275:1921556192155619229171362Geobacillus sp. Y412MC52 chromosome, complete genomeextracellular solute-binding protein family 12e-0860.5
NC_013411:2767400:2781619278161927829831365Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 12e-0860.5
NC_015385:2135456:2146837214683721481171281Treponema succinifaciens DSM 2489 chromosome, complete genomeextracellular solute-binding protein family 13e-0860.1
NC_016582:11820671:1184283111842831118441951365Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative solute-binding lipoprotein4e-0859.7
NC_009089:3998347:3999672399967240009821311Clostridium difficile 630, complete genomeABC transporter, solute-binding protein5e-0859.3
NC_013316:3863728:3865053386505338663631311Clostridium difficile R20291, complete genomeABC transporter, solute-binding protein6e-0859.3
NC_017080:575000:5966045966045980911488Phycisphaera mikurensis NBRC 102666, complete genomeputative ABC transporter substrate binding protein6e-0859.3
NC_016641:4011000:4028112402811240294521341Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-0858.9
NC_016860:4024000:4046385404638540476951311Salmonella enterica subsp. enterica serovar Typhimurium strglycerol-3-phosphate-binding periplasmic protein9e-0858.5
NC_013850:4829455:4856074485607448573841311Klebsiella variicola At-22 chromosome, complete genomeextracellular solute-binding protein family 11e-0758.2
NC_011283:5011497:5033154503315450344641311Klebsiella pneumoniae 342 chromosome, complete genomeABC transporter substrate-binding protein1e-0758.2
NC_013929:257635:2629282629282642051278Streptomyces scabiei 87.22 chromosome, complete genomesolute binding lipoprotein2e-0757.8
NC_013411:2739989:2761338276133827626631326Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 12e-0757.4
NC_013592:713036:7527397527397540611323Dickeya dadantii Ech586, complete genomeextracellular solute-binding protein family 12e-0757
NC_014364:1899983:1918380191838019196721293Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 13e-0757
NC_013521:302574:3200153200153212951281Sanguibacter keddieii DSM 10542, complete genomecarbohydrate-binding protein3e-0756.6
NC_016582:1751988:1764160176416017654761317Streptomyces bingchenggensis BCW-1 chromosome, complete genomesolute binding lipoprotein3e-0756.6
NC_012880:3827390:3830190383019038314971308Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 14e-0756.2
NC_012912:3853377:3854455385445538557771323Dickeya zeae Ech1591, complete genomeextracellular solute-binding protein family 14e-0756.2
NC_008095:6697789:6697789669778966999692181Myxococcus xanthus DK 1622, complete genomeputative sugar ABC transporter, permease protein/periplasmic sugar-binding protein5e-0756.2
NC_013517:773280:7751637751637764041242Sebaldella termitidis ATCC 33386, complete genomeextracellular solute-binding protein family 16e-0755.8
NC_015953:5865733:5905559590555959068211263Streptomyces sp. SirexAA-E chromosome, complete genomefamily 1 extracellular solute-binding protein7e-0755.5
UCMB5137:2054735:2092017209201720933151299Bacillus atrophaeus UCMB-5137pectin degradation byproducts-binding lipoprotein7e-0755.5
NC_003366:461602:4790084790084802761269Clostridium perfringens str. 13, complete genomehypothetical protein1e-0655.1
NC_021182:966839:9705849705849718611278Clostridium pasteurianum BC1, complete genomeABC-type sugar transport system, periplasmic component1e-0654.7
NC_010001:4168817:4172661417266141740161356Clostridium phytofermentans ISDg, complete genomeextracellular solute-binding protein family 11e-0654.7
NC_020126:7661551:7665209766520976673832175Myxococcus stipitatus DSM 14675, complete genomeputative sugar ABC transporter permease/periplasmic sugar-binding protein1e-0654.7
NC_009482:87193:1085081085081097821275Synechococcus sp. RCC307 chromosome, complete genomesugar ABC transporter periplasmic protein2e-0654.3
NC_015520:2859820:2864204286420428655201317Mahella australiensis 50-1 BON chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0654.3
NC_014650:2500817:2511401251140125128101410Geobacillus sp. Y4.1MC1 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0654.3
NC_016641:4653889:4671448467144846727221275Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0653.9
NC_016641:2618587:2645924264592426471771254Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0653.9
NC_013521:940495:9554699554699567851317Sanguibacter keddieii DSM 10542, complete genomecarbohydrate-binding protein2e-0653.9
NC_014761:74500:9164691646928451200Oceanithermus profundus DSM 14977 chromosome, complete genomecarbohydrate ABC transporter substrate-binding protein, cut1 family2e-0653.9
NC_019896:1989997:1999551199955120007561206Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeSugar ABC transporter substrate-binding protein3e-0653.5
NC_015690:2039215:2052584205258420539121329Paenibacillus mucilaginosus KNP414 chromosome, complete genomeextracellular solute-binding protein4e-0653.1
NC_009437:475817:4804424804424816471206Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular solute-binding protein4e-0653.1
NC_014829:1154520:1155755115575511570861332Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeextracellular solute-binding protein family 14e-0653.1
NC_020210:1951746:1962799196279919641211323Geobacillus sp. GHH01, complete genomeExtracellular solute-binding protein family 15e-0652.8
NC_009443:142500:1541291541291555561428Streptococcus suis 98HAH33, complete genomesugar ABC transporter periplasmic protein6e-0652.8
NC_011886:3903343:3915675391567539170121338Arthrobacter chlorophenolicus A6, complete genomeextracellular solute-binding protein family 17e-0652.4
NC_019673:895418:9042609042609055011242Saccharothrix espanaensis DSM 44229 complete genomeABC-type transporter, substrate-binding lipoprotein, family 18e-0652
NC_014644:1532500:1554471155447115556941224Gardnerella vaginalis ATCC 14019 chromosome, complete genomeABC transporter binding protein8e-0652
NC_012926:140000:1543541543541556281275Streptococcus suis BM407 chromosome, complete genomeextracellular solute-binding lipoprotein1e-0551.6
NC_012924:142500:1543751543751556491275Streptococcus suis SC84, complete genomeextracellular solute-binding lipoprotein1e-0551.6
NC_012925:140000:1545701545701558441275Streptococcus suis P1/7, complete genomeextracellular solute-binding lipoprotein1e-0551.6