Pre_GI: BLASTP Hits

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Query: NC_016582:7101701:7111063 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 7111063, End: 7111593, Length: 531

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013729:380312:391510391510392364855Kribbella flavida DSM 17836, complete genometranscriptional regulator, GntR family3e-1374.7
NC_013729:2258582:227234522723452272686342Kribbella flavida DSM 17836, complete genometranscriptional regulator, GntR family1e-1272.4
NC_021177:4221309:423668742366874237553867Streptomyces fulvissimus DSM 40593, complete genomeGntR-family transcriptional regulator1e-1169.3
NC_014210:144036:153050153050153823774Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, GntR family2e-1168.9
NC_020133:5485528:549970854997085500487780Mycobacterium liflandii 128FXT, complete genomeregulatory protein3e-1168.2
NC_016947:666627:675648675648676442795Mycobacterium intracellulare MOTT-02 chromosome, complete genomeregulatory protein3e-1167.8
NC_007644:1352794:135596513559651356696732Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, GntR family1e-1065.9
NC_003888:4377000:438548643854864386217732Streptomyces coelicolor A3(2), complete genomeGntR-family transcriptional regulator2e-1065.1
NC_014318:9604367:962238796223879622740354Amycolatopsis mediterranei U32 chromosome, complete genomeGntR family transcriptional regulator2e-1065.1
NC_017186:9604427:962244796224479622800354Amycolatopsis mediterranei S699 chromosome, complete genomeGntR family transcriptional regulator2e-1065.1
NC_013235:682902:696087696087696872786Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, GntR family3e-1064.7
NC_016948:678939:688007688007688786780Mycobacterium intracellulare MOTT-64 chromosome, complete genometranscriptional regulator3e-1064.3
NC_014815:6779538:679056667905666791432867Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family6e-1063.9
NC_014391:16188:244592445925325867Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein GntR HTH6e-1063.9
NC_014666:7152782:716610971661097166882774Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, GntR family7e-1063.5
NC_014363:114239:129522129522129881360Olsenella uli DSM 7084 chromosome, complete genometranscriptional regulator, GntR family7e-1063.5
NC_007644:1352794:135436113543611355110750Moorella thermoacetica ATCC 39073, complete genomeregulatory protein GntR, HTH9e-1063.2
NC_021177:4124839:413046841304684131211744Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator, GntR family with UTRA sensor domain9e-1063.2
NC_003888:4613000:462376646237664624524759Streptomyces coelicolor A3(2), complete genomeGntR-family regulatory protein1e-0962.8
NC_019673:8348604:836221383622138362611399Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-0962.4
NC_015953:2603526:261081926108192611727909Streptomyces sp. SirexAA-E chromosome, complete genomeGntR family transcriptional regulator2e-0962
NC_016113:803268:812013812013812744732Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceProtein korA2e-0962
NC_009953:1799416:180600218060021806868867Salinispora arenicola CNS-205 chromosome, complete genomeGntR family transcriptional regulator2e-0961.6
NC_013093:7437033:745068174506817451064384Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, GntR family3e-0961.2
NC_019673:1420198:143062914306291431012384Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-0961.2
NC_015555:1989463:200663720066372007359723Thermoanaerobacterium xylanolyticum LX-11 chromosome, completetranscriptional regulator, GntR family with UTRA sensor domain4e-0960.8
NC_019970:2263427:227858222785822279304723Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional regulator6e-0960.5
NC_015687:2632557:265543326554332656128696Clostridium acetobutylicum DSM 1731 chromosome, complete genomeFadR family transcriptional regulator6e-0960.5
NC_015376:2061990:208370120837012084468768Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator6e-0960.5
NC_013093:1213908:123094312309431231323381Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, GntR family5e-0960.5
NC_015656:1469501:148617614861761486967792Frankia symbiont of Datisca glomerata chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain7e-0960.1
NC_016114:3575955:358827135882713589014744Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeGntR family transcriptional regulator9e-0959.7
NC_015389:1977736:198394319839431984632690Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, GntR family1e-0859.7
NC_011899:1603500:1607699160769916088051107Halothermothrix orenii H 168, complete genomeregulatory protein GntR HTH1e-0859.3
NC_019673:1275627:129120512912051291603399Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-0859.3
NC_015733:3736104:378283237828323783611780Pseudomonas putida S16 chromosome, complete genomeDNA-binding transcriptional regulator GlcC2e-0858.9
NC_015656:381554:392794392794393570777Frankia symbiont of Datisca glomerata chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain1e-0858.9
NC_018750:2270314:227346522734652274223759Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-0858.9
NC_014328:3482980:3506242350624235076901449Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator2e-0858.5
NC_014815:658893:664402664402665223822Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family2e-0858.5
NC_014165:92500:101315101315101695381Thermobispora bispora DSM 43833 chromosome, complete genomeGntR family transcriptional regulator2e-0858.5
NC_013595:151500:158906158906159691786Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family3e-0858.2
NC_003155:4592000:460272746027274603485759Streptomyces avermitilis MA-4680, complete genomeGntR-family transcriptional regulator3e-0858.2
NC_014377:321949:321949321949322656708Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, GntR family3e-0857.8
NC_015589:38418:5409554095554821388Desulfotomaculum ruminis DSM 2154 chromosome, complete genome4e-0857.8
NC_007777:5087405:509495850949585095722765Frankia sp. CcI3, complete genometranscriptional regulator, GntR family4e-0857.8
NC_015424:2510764:252788125278812528600720Aeromonas veronii B565 chromosome, complete genometranscriptional regulator of succinyl-CoA synthetase operon6e-0857
NC_013729:2157785:217111721711172171860744Kribbella flavida DSM 17836, complete genometranscriptional regulator, GntR family5e-0857
NC_008390:2156188:215618821561882156958771Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, GntR family7e-0856.6
NC_014639:1:3239432394337761383Bacillus atrophaeus 1942 chromosome, complete genomeGntR family transcriptional regulator9e-0856.2
CP002207:1:3239432394337761383Bacillus atrophaeus 1942, complete genomeGntR family transcriptional regulator9e-0856.2
NC_010694:2492378:250906425090642509819756Erwinia tasmaniensis, complete genomeGntR-family transcriptional regulatory protein1e-0756.2
NC_013235:508585:524691524691525431741Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, GntR family1e-0756.2
NC_015733:3595882:361682836168283617592765Pseudomonas putida S16 chromosome, complete genomeDNA-binding transcriptional regulator GlcC1e-0756.2
NC_020181:527592:5701745701745715531380Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator, GntR family domain / Aspartate aminotransferase1e-0755.8
NC_014815:2363460:237886623788662379090225Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family1e-0755.8
NC_013510:5499447:552018155201815520483303Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, GntR family1e-0755.8
NC_013929:5248000:526121052612105261998789Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator1e-0755.8
UCMB5137:1:2421124211255931383Bacillus atrophaeus UCMB-5137GntR family transcriptional regulator1e-0755.8
NC_003366:461602:4684394684394700011563Clostridium perfringens str. 13, complete genomeprobable transcription regulator2e-0755.5
NC_016115:62493:637116371164466756Streptomyces flavogriseus ATCC 33331 plasmid pSFLA02, completetranscriptional regulator, GntR family2e-0755.5
NC_013595:9547254:956468295646829565155474Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family2e-0755.5
NC_016514:1142607:1146635114663511480411407Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YjiR2e-0755.5
NC_019897:329945:376575376575376955381Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator2e-0755.5
NC_003888:3602753:360891636089163609695780Streptomyces coelicolor A3(2), complete genomekorSA, regulatory protein3e-0755.1
NC_014829:3964616:398018939801893980911723Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional regulator, GntR family2e-0755.1
NC_018750:3249756:325719232571923257971780Streptomyces venezuelae ATCC 10712, complete genomeGntR-family transcriptional regulator2e-0755.1
NC_013501:1337489:134428613442861345053768Rhodothermus marinus DSM 4252, complete genomeGntR domain protein2e-0755.1
NC_013510:5499447:551960755196075520026420Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, GntR family2e-0755.1
NC_020291:5093138:511164951116495112383735Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeregulatory protein GntR, HTH2e-0755.1
NC_003155:4906639:491297149129714913759789Streptomyces avermitilis MA-4680, complete genomeregulatory protein KorSA, GntR-family transcriptional regulator3e-0754.7
NC_009725:2859630:286726728672672867659393Bacillus amyloliquefaciens FZB42, complete genomeYtrA3e-0754.7
NC_003911:1791878:1796102179610217975051404Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, GntR family3e-0754.7
NC_003888:6103534:613628961362896137068780Streptomyces coelicolor A3(2), complete genometranscriptional regulator3e-0754.7
NC_015957:1070500:107590210759021076678777Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGntR family transcriptional regulator3e-0754.7
NC_016582:5393568:540514154051415405914774Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator3e-0754.7
NC_015635:4097711:4130699413069941320931395Microlunatus phosphovorus NM-1, complete genomeGntR family transcriptional regulator4e-0754.3
NC_008278:1845000:185660018566001857508909Frankia alni ACN14a, complete genomePutative transcriptional regulator (GntR-family)4e-0754.3
NC_009848:161373:170355170355170726372Bacillus pumilus SAFR-032, complete genomeGntR family transcriptional regulator4e-0754.3
NC_016109:5455060:547507154750715475418348Kitasatospora setae KM-6054, complete genomeGntR family transcriptional regulator4e-0754.3
NC_003155:4592000:462092046209204621708789Streptomyces avermitilis MA-4680, complete genomeregulatory protein KorSA, GntR-family transcriptional regulator5e-0753.9
NC_009255:916000:921112921112921807696Burkholderia vietnamiensis G4 chromosome 2, complete sequencehistidine utilization repressor5e-0753.9
NC_018515:3600869:362844736284473629145699Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator5e-0753.9
NC_013093:1411882:142248314224831423250768Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, GntR family5e-0753.9
NC_009617:3647500:366042136604213661161741Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeGntR family transcriptional regulator7e-0753.5
NC_003888:3602753:361362836136283614359732Streptomyces coelicolor A3(2), complete genomegntR-family regulator7e-0753.5
NC_011835:1819707:182058218205821821001420Bifidobacterium animalis subsp. lactis AD011 chromosome, completeregulatory protein GntR7e-0753.5
NC_017216:1092751:109362610936261094045420Bifidobacterium animalis subsp. lactis BLC1, complete genometranscriptional regulator, gntR family protein7e-0753.5
NC_011740:3739395:374508437450843745848765Escherichia fergusonii ATCC 35469, complete genomeputative GntR-family transcriptional regulator9e-0753.1
NC_013199:392450:395358395358396098741Lactobacillus rhamnosus Lc 705, complete genometranscriptional regulator, GntR family1e-0652.8
NC_010572:3925803:393580339358033936576774Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative GntR-family transcriptional regulator1e-0652.8
NC_002976:1540794:154170815417081542085378Staphylococcus epidermidis RP62A, complete genometranscriptional regulator, GntR family1e-0652.8
NC_012815:1092795:109367010936701094206537Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein1e-0652.8
NC_012814:1092860:109373510937351094271537Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein1e-0652.8
NC_017217:1092916:109379110937911094327537Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein1e-0652.8
NC_013595:9547254:956146795614679561802336Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family1e-0652.8
NC_013595:3541012:355596035559603556841882Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family2e-0652.4
NC_016114:3008500:302031030203103021026717Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeGntR family transcriptional regulator1e-0652.4
NC_004193:375416:640434640434641180747Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator1e-0652.4
NC_014479:2505823:252667125266712527399729Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeGntR family transcriptional regulator1e-0652.4
NC_009921:1611132:161877516187751619167393Frankia sp. EAN1pec, complete genometranscriptional regulator, GntR family2e-0652
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome2e-0652
NC_014165:92500:104440104440104859420Thermobispora bispora DSM 43833 chromosome, complete genomeGntR family transcriptional regulator2e-0652
NC_006526:1976779:1999286199928620006591374Zymomonas mobilis subsp. mobilis ZM4, complete genometranscriptional regulatory protein2e-0652
NC_009328:1903291:1904069190406919051631095Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeprotein AraR2e-0652
NC_014318:6817860:682515368251536825500348Amycolatopsis mediterranei U32 chromosome, complete genomeGntR family transcriptional regulator2e-0652
NC_017186:6817904:682519768251976825544348Amycolatopsis mediterranei S699 chromosome, complete genomeGntR family transcriptional regulator2e-0652
NC_016582:11820671:118416551184165511842452798Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator2e-0652
NC_017214:1727676:172855117285511729246696Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeGntR family transcriptional regulator2e-0652
NC_017215:1091941:109343310934331094128696Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,GntR family transcriptional regulator2e-0652
NC_016626:1825845:1851434185143418528551422Burkholderia sp. YI23 plasmid byi_1p, complete sequenceGntR family transcriptional regulator3e-0651.6
NC_020210:1951746:1968428196842819695221095Geobacillus sp. GHH01, complete genomearabinose metabolism transcriptional repressor3e-0651.6
NC_014966:1668822:169026116902611691052792Vibrio vulnificus MO6-24/O chromosome II, complete sequencetranscriptional regulator2e-0651.6
NC_016604:3137694:313854031385403139238699Mycobacterium rhodesiae NBB3 chromosome, complete genometranscriptional regulator2e-0651.6
NC_018515:3169973:318893631889363189691756Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator2e-0651.6
NC_007509:832473:839275839275839937663Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, GntR family2e-0651.6
NC_016109:785819:803804803804804082279Kitasatospora setae KM-6054, complete genomeGntR family transcriptional regulator4e-0651.2
NC_020207:1346579:136319713631971363925729Enterococcus faecium NRRL B-2354, complete genomeTranscriptional regulator3e-0651.2
NC_015656:5084767:510324051032405103626387Frankia symbiont of Datisca glomerata chromosome, complete genomeGntR family transcriptional regulator3e-0651.2
NC_016114:3575955:359011635901163590871756Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeGntR family transcriptional regulator3e-0651.2
NC_014364:815346:820369820369821073705Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeGntR domain protein3e-0651.2
NC_006510:1921541:1944770194477019458641095Geobacillus kaustophilus HTA426, complete genomearabinose metabolism transcriptional repressor3e-0651.2
NC_016593:2015321:2015321201532120164151095Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completearabinose metabolism transcriptional repressor3e-0651.2
NC_013411:2767400:2789798278979827908921095Geobacillus sp. Y412MC61, complete genometranscriptional regulator, GntR family with LacI sensor3e-0651.2
NC_014915:1909275:1929734192973419308281095Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, GntR family with LacI sensor3e-0651.2
NC_008268:361424:374193374193374933741Rhodococcus sp. RHA1, complete genometranscriptional regulator, GntR family3e-0651.2
NC_014206:1694330:1708771170877117098651095Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator3e-0651.2
NC_014210:723719:733347733347734111765Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, GntR family3e-0651.2
NC_017093:2357583:236657423665742367317744Actinoplanes missouriensis 431, complete genomeGntR family transcriptional regulator3e-0651.2
NC_014815:5888934:589798058979805898219240Micromonospora sp. L5 chromosome, complete genomeregulatory protein gntr hth4e-0650.8
NC_012721:137046:144816144816145547732Burkholderia glumae BGR1 chromosome 2, complete genomeGntR domain protein4e-0650.8
NC_015312:1191633:119976011997601200617858Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeGntR family transcriptional regulator4e-0650.8
NC_011593:2014787:202250120225012022875375Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,regulatory protein GntR4e-0650.8
NC_017219:2014605:202231920223192022693375Bifidobacterium longum subsp. infantis ATCC 15697, complete genometranscriptional regulator4e-0650.8
NC_003888:4377000:438361643836164384371756Streptomyces coelicolor A3(2), complete genomeGntR-family transcriptional regulator4e-0650.8
NC_021177:4124839:413883841388384139617780Streptomyces fulvissimus DSM 40593, complete genomekorSA, regulatory protein6e-0650.4
NC_003888:3602753:361548036154803616235756Streptomyces coelicolor A3(2), complete genomegntR-family regulator5e-0650.4
NC_015064:1355065:137103413710341371891858Acidobacterium sp. MP5ACTX9 chromosome, complete genomeGntR domain protein5e-0650.4
NC_008262:2649289:265001426500142650736723Clostridium perfringens SM101, complete genometranscriptional regulator, GntR family5e-0650.4
NC_004193:375416:546902546902547279378Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator5e-0650.4
NC_020911:1353896:1364156136415613655561401Octadecabacter antarcticus 307, complete genomeGntR family transcriptional regulator5e-0650.4
NC_015942:63440:819408194082698759Acidithiobacillus ferrivorans SS3 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain7e-0650.1
NC_021177:4124839:412860941286094129364756Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator, GntR family8e-0650.1
NC_014815:841484:883337883337883576240Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family8e-0650.1
NC_009654:91096:9749297492990691578Marinomonas sp. MWYL1, complete genomeGntR family transcriptional regulator9e-0649.7
NC_006677:1255079:126827412682741269014741Gluconobacter oxydans 621H, complete genomeHistidine utilization repressor1e-0549.7