Pre_GI: BLASTP Hits

Some Help

Query: NC_016582:7101701:7106624 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 7106624, End: 7108105, Length: 1482

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016109:4581467:4588101458810145895611461Kitasatospora setae KM-6054, complete genomeputative replication initiation protein4e-163574
NC_018750:4333064:4334415433441543358181404Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein2e-110400
NC_016114:3575955:3577999357799935794141416Streptomyces flavogriseus ATCC 33331 chromosome, complete genomereplication initiator protein1e-109397
NC_021177:3997727:4015490401549040168991410Streptomyces fulvissimus DSM 40593, complete genomeReplication initiation protein2e-108393
NC_003888:5790104:5815050581505058164141365Streptomyces coelicolor A3(2), complete genomereplication initiation protein2e-108393
NC_014165:92500:9688996889982741386Thermobispora bispora DSM 43833 chromosome, complete genomehypothetical protein5e-108391
NC_013510:5115500:5138705513870551401291425Thermomonospora curvata DSM 43183, complete genomehypothetical protein7e-107388
NC_003888:3602753:3604104360410436055041401Streptomyces coelicolor A3(2), complete genomereplication initiator protein2e-102373
NC_013929:3299736:3338089333808933394561368Streptomyces scabiei 87.22 chromosome, complete genomereplication initiation protein5e-102372
NC_013929:5248000:5265558526555852669581401Streptomyces scabiei 87.22 chromosome, complete genome6e-102371
NC_010572:3925803:3929834392983439310151182Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative replication initiator protein1e-99363
NC_003155:4592000:4616145461614546174581314Streptomyces avermitilis MA-4680, complete genomereplication initiation protein2e-98359
NC_003155:4906639:4908187490818749095541368Streptomyces avermitilis MA-4680, complete genomereplication initiation protein1e-97357
NC_014210:723719:7384367384367398451410Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,hypothetical protein1e-96354
NC_013595:9547254:9556985955698595583851401Streptosporangium roseum DSM 43021, complete genomehypothetical protein4e-95348
NC_019673:8581000:8594700859470085960911392Saccharothrix espanaensis DSM 44229 complete genomeReplication initiator protein1e-94347
NC_014210:144036:1508071508071522431437Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,replication initiation protein2e-93343
NC_003888:4314389:4330663433066343320211359Streptomyces coelicolor A3(2), complete genomeplasmid replication initiator protein4e-93342
NC_013929:5927935:5936300593630059376701371Streptomyces scabiei 87.22 chromosome, complete genome5e-91335
NC_013093:1213908:1235465123546512367751311Actinosynnema mirum DSM 43827, complete genomehypothetical protein5e-90332
NC_019673:8799533:8823408882340888247751368Saccharothrix espanaensis DSM 44229 complete genomeReplication initiator protein6e-90331
NC_019673:1275627:1294404129440412957441341Saccharothrix espanaensis DSM 44229 complete genomeReplication initiator protein5e-88325
NC_013093:1411882:1427716142771614290591344Actinosynnema mirum DSM 43827, complete genomehypothetical protein1e-85317
NC_016582:5393568:5408200540820054096181419Streptomyces bingchenggensis BCW-1 chromosome, complete genomeplasmid replication initiator protein7e-84311
NC_009953:1799416:1799416179941618007651350Salinispora arenicola CNS-205 chromosome, complete genomereplication initiation protein8e-82304
NC_015957:1070500:1072172107217210735871416Streptomyces violaceusniger Tu 4113 chromosome, complete genomeplasmid replication initiator protein1e-80300
NC_015656:381554:3867733867733882931521Frankia symbiont of Datisca glomerata chromosome, complete genomeputative plasmid replication initiator protein4e-71269
NC_015635:811500:8116848116848131201437Microlunatus phosphovorus NM-1, complete genomereplication initiation protein4e-70265
NC_014830:3275474:3281927328192732834771551Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein4e-69262
NC_007777:4892150:4927773492777349292181446Frankia sp. CcI3, complete genomeputative replication initiation protein9e-68258
NC_015312:5579078:5593189559318955947091521Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein2e-65250
NC_007777:5087405:5101068510106851025881521Frankia sp. CcI3, complete genomeputative plasmid replication initiator protein3e-65249
NC_007777:4016000:4030804403080440322341431Frankia sp. CcI3, complete genomeputative replication initiation protein4e-65249
NC_013235:682902:6986956986957002631569Nakamurella multipartita DSM 44233, complete genomehypothetical protein1e-62241
NC_007777:4892150:4895926489592648973561431Frankia sp. CcI3, complete genomeputative replication initiation protein2e-62240
NC_007777:4954306:4963600496360049650781479Frankia sp. CcI3, complete genomeputative replication initiation protein1e-61238
NC_015434:228912:2425072425072440691563Verrucosispora maris AB-18-032 chromosome, complete genomeputative plasmid replication initiator protein1e-61238
NC_013729:2157785:2177874217787421794361563Kribbella flavida DSM 17836, complete genomehypothetical protein9e-62238
NC_007777:2459357:2472387247238724738231437Frankia sp. CcI3, complete genomeputative replication initiation protein4e-61236
NC_009953:1799416:1812200181220018137651566Salinispora arenicola CNS-205 chromosome, complete genomeputative plasmid replication initiator protein7e-61235
NC_014391:6000834:6014630601463060164141785Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeputative plasmid replication initiator protein2e-57223
NC_008278:3025899:3029588302958830307871200Frankia alni ACN14a, complete genomeputative replication initiator protein2e-54214
NC_008278:3169500:3174103317410331753591257Frankia alni ACN14a, complete genomeReplication initiator protein1e-54214
NC_015434:6020178:6040469604046960420101542Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein5e-52205
NC_008595:3914463:3923290392329039247891500Mycobacterium avium 104, complete genomereplication initiation protein2e-48194
NC_017904:4742775:4777763477776347793971635Mycobacterium sp. MOTT36Y chromosome, complete genomereplication initiator protein3e-46186
NC_014168:1963129:1979285197928519806911407Segniliparus rotundus DSM 44985 chromosome, complete genomereplication initiation protein3e-43176
NC_014666:1601972:1606944160694416082691326Frankia sp. EuI1c chromosome, complete genomereplication initiator protein9e-43174
NC_016947:2380500:2441079244107924425211443Mycobacterium intracellulare MOTT-02 chromosome, complete genomeputative plasmid replication initiator protein4e-39162
NC_008705:3377697:3386041338604133875401500Mycobacterium sp. KMS, complete genomeputative plasmid replication initiator protein4e-39162
NC_009077:3323291:3331635333163533331341500Mycobacterium sp. JLS, complete genomeputative plasmid replication initiator protein4e-39162
NC_008146:3349415:3357759335775933592581500Mycobacterium sp. MCS, complete genomeputative plasmid replication initiator protein4e-39162
NC_003155:3652587:368515936851593685857699Streptomyces avermitilis MA-4680, complete genomereplication initiator protein2e-35150
NC_003888:4377000:439012243901224390649528Streptomyces coelicolor A3(2), complete genomepartial replication initiator protein1e-24115
NC_017093:835260:845335845335845892558Actinoplanes missouriensis 431, complete genomehypothetical protein1e-1688.2
NC_009142:6729512:6734536673453667360171482Saccharopolyspora erythraea NRRL 2338, complete genomereplication initiator protein1e-0965.1