Pre_GI: BLASTP Hits

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Query: NC_016582:7033000:7062036 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 7062036, End: 7062554, Length: 519

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:3598700:361396736139673614665699Streptomyces fulvissimus DSM 40593, complete genomeIstB domain protein ATP-binding protein3e-46184
NC_016111:2932495:294058129405812941279699Streptomyces cattleya NRRL 8057, complete genomeDNA replication protein2e-45181
NC_014210:5270643:529083852908385291530693Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,IstB domain protein ATP-binding protein5e-32136
NC_018750:6132619:614558961455896146341753Streptomyces venezuelae ATCC 10712, complete genomeIstB ATP-binding protein3e-30130
NC_018750:2270314:228826922882692289006738Streptomyces venezuelae ATCC 10712, complete genomeHelicase loader DnaI3e-22104
NC_015437:1494777:150757615075761508340765Selenomonas sputigena ATCC 35185 chromosome, complete genomeIstB domain protein ATP-binding protein4e-1787.4
NC_016111:3026000:303877230387723038921150Streptomyces cattleya NRRL 8057, complete genomehypothetical protein5e-1373.9
NC_018750:2270314:229097822909782291253276Streptomyces venezuelae ATCC 10712, complete genomeputative DNA replication protein4e-1270.9
NC_009633:2592000:262468326246832625435753Alkaliphilus metalliredigens QYMF chromosome, complete genomeIstB ATP binding domain-containing protein3e-1167.8
NC_006582:2944237:298280129828012983637837Bacillus clausii KSM-K16, complete genomehypothetical protein6e-1167
NC_013525:1953920:195704119570411957883843Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeIstB domain protein ATP-binding protein7e-1166.6
NC_018870:1506918:151971615197161520501786Thermacetogenium phaeum DSM 12270 chromosome, complete genomeIstB-like ATP-binding protein8e-1166.6
NC_011770:860944:876266876266877054789Pseudomonas aeruginosa LESB58, complete genomeDNA replication protein DnaC2e-1065.5
NC_013170:311045:337444337444338010567Cryptobacterium curtum DSM 15641, complete genomehypothetical protein6e-1063.5
NC_017167:1648913:165272716527271653611885Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA replication protein-like protein1e-0962.8
NC_020134:420500:428821428821429711891Clostridium stercorarium subsp. stercorarium DSM 8532, completeIstB domain-containing ATP-binding protein1e-0962.4
NC_009253:529494:541539541539542381843Desulfotomaculum reducens MI-1 chromosome, complete genomehypothetical protein3e-0961.2
NC_010501:4379920:438299643829964383778783Pseudomonas putida W619, complete genomeIstB domain protein ATP-binding protein6e-0960.1
NC_006177:3457637:3479451347945134804761026Symbiobacterium thermophilum IAM 14863, complete genomeDNA replication protein DnaC8e-0959.7
NC_009012:2927793:293967029396702940506837Clostridium thermocellum ATCC 27405, complete genomereplicative DNA helicase9e-0959.7
NC_012034:2623252:262431226243122625097786Anaerocellum thermophilum DSM 6725, complete genomeAAA ATPase2e-0858.5
NC_013204:989103:1005551100555110065821032Eggerthella lenta DSM 2243, complete genomeAAA ATPase3e-0858.2
NC_008789:707916:716482716482717255774Halorhodospira halophila SL1, complete genomeIstB domain protein ATP-binding protein6e-0857
NC_013223:724394:762973762973763800828Desulfohalobium retbaense DSM 5692, complete genomeIstB domain protein ATP-binding protein2e-0755.1
NC_009972:606393:610763610763611473711Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomeIstB ATP binding domain-containing protein3e-0754.7
NC_014011:1139818:115524511552451156177933Aminobacterium colombiense DSM 12261 chromosome, complete genomeIstB domain protein ATP-binding protein5e-0753.9
NC_012658:2525931:253601325360132536801789Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein7e-0753.5
NC_015145:1045264:105746710574671058255789Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeDNA replication protein9e-0753.1
NC_012563:2597934:260330226033022604105804Clostridium botulinum A2 str. Kyoto, complete genomeputative DNA replication protein DnaC1e-0652.4
NC_014314:576465:5988545988546001731320Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeIstB domain-containing protein ATP-binding protein4e-0650.8
NC_013194:102000:103348103348104151804Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeIstB domain protein ATP-binding protein9e-0649.7
NC_013194:4305205:431003643100364310839804Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeIstB domain protein ATP-binding protein9e-0649.7
NC_011662:386162:431293431293432081789Thauera sp. MZ1T, complete genomeIstB domain protein ATP-binding protein9e-0649.7