Pre_GI: BLASTP Hits

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Query: NC_016582:7033000:7057992 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 7057992, End: 7059947, Length: 1956

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009380:636000:6372476372476385631317Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein9e-92338
NC_016947:2210339:2226740222674022280021263Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein2e-90333
NC_013757:780835:8040218040218053311311Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein6e-89328
NC_009464:650997:6650886650886666471560Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein1e-57224
NC_010814:243384:2626562626562642721617Geobacter lovleyi SZ, complete genomehypothetical protein2e-55218
NC_009848:720510:7278147278147293041491Bacillus pumilus SAFR-032, complete genomeATP-binding protein4e-55216
NC_008095:4189082:4197665419766541992511587Myxococcus xanthus DK 1622, complete genomeATPase8e-54212
NC_008009:5044612:5068221506822150698101590Acidobacteria bacterium Ellin345, complete genomehypothetical protein3e-52206
NC_010322:5293652:5309753530975353113661614Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein6e-51202
NC_014507:2174500:2180963218096321824681506Methanoplanus petrolearius DSM 11571 chromosome, complete genomeATP-binding region ATPase domain-containing protein5e-51202
NC_016582:7033000:7052108705210870535831476Streptomyces bingchenggensis BCW-1 chromosome, complete genomeATPase2e-49197
NC_015953:3456535:3477400347740034791001701Streptomyces sp. SirexAA-E chromosome, complete genomeRelaxase/mobilization nuclease family protein8e-49195
NC_013757:780835:8002828002828018441563Geodermatophilus obscurus DSM 43160, complete genomeATPase2e-48194
NC_011144:2770842:2773193277319327747161524Phenylobacterium zucineum HLK1, complete genomehypothetical protein6e-48192
NC_015138:5046921:5056260505626050577111452Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeATP-binding region ATPase domain-containing protein2e-47191
NC_016111:3052494:3063912306391230653871476Streptomyces cattleya NRRL 8057, complete genomeHistidine kinase2e-47191
NC_013061:1052957:1086989108698910884491461Pedobacter heparinus DSM 2366, complete genomeATPase1e-47191
NC_014311:1:1048410484119351452Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein3e-47190
NC_013929:5850599:5850599585059958522691671Streptomyces scabiei 87.22 chromosome, complete genomemobilisation relaxase component3e-47190
NC_019842:3755275:3785338378533837867951458Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,type II restriction-modification system4e-47189
NC_011989:2262881:2279501227950122809851485Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein9e-47188
NC_017191:3766960:3774807377480737762641458Bacillus amyloliquefaciens XH7 chromosome, complete genometype II restriction-modification system2e-46187
NC_017190:3812065:3819912381991238213691458Bacillus amyloliquefaciens LL3 chromosome, complete genomeATP-binding protein2e-46187
NC_017188:3764061:3773115377311537745721458Bacillus amyloliquefaciens TA208 chromosome, complete genomeATP-binding protein2e-46187
NC_014551:3797047:3804889380488938063461458Bacillus amyloliquefaciens DSM 7, complete genomeATP-binding protein2e-46187
NC_020908:1889759:1896126189612618976341509Octadecabacter arcticus 238, complete genomeputative ATP-binding protein2e-46187
NC_012968:2000218:2013920201392020153501431Methylotenera mobilis JLW8, complete genomehypothetical protein3e-46186
NC_007969:2885249:2908103290810329095631461Psychrobacter cryohalolentis K5, complete genomehypothetical protein7e-46186
NC_008700:312099:3217363217363231871452Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein1e-45185
NC_016641:2587000:2594225259422525957001476Paenibacillus terrae HPL-003 chromosome, complete genomeATP-binding protein8e-46185
NC_016111:2932495:2936076293607629378481773Streptomyces cattleya NRRL 8057, complete genomerelaxases/mobilisation protein7e-45182
NC_015846:24771:3399933999355071509Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein1e-44181
NC_016109:3963189:3981630398163039831021473Kitasatospora setae KM-6054, complete genomehypothetical protein4e-44179
NC_014010:1392536:1434654143465414361231470Candidatus Puniceispirillum marinum IMCC1322 chromosome, completehypothetical protein8e-42172
NC_008686:2080770:2087606208760620891081503Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein1e-40168
NC_018750:5293829:5311730531173053134301701Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-40168
NC_015152:1602412:1616858161685816183451488Spirochaeta sp. Buddy chromosome, complete genomeATP-binding region ATPase domain-containing protein2e-39164
NC_015510:3273308:3287335328733532888161482Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeATP-binding domain-containing protein2e-39164
NC_020126:5558613:5582401558240155844012001Myxococcus stipitatus DSM 14675, complete genomeATPase7e-38159
NC_011566:4709672:4728291472829147297871497Shewanella piezotolerans WP3, complete genomehypothetical protein6e-36152
NC_016109:4485925:4507578450757845093651788Kitasatospora setae KM-6054, complete genomehypothetical protein3e-35150
NC_015497:4683741:4698040469804046994101371Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein7e-35149
NC_016111:3026000:3041114304111430428501737Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-34147
NC_015147:9761:1098410984124411458Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE302, completeDNA mismatch repair enzyme (predicted ATPase)1e-33145
NC_016114:3439273:3458862345886234605921731Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeRelaxase/mobilization nuclease1e-32141
NC_015953:3227000:3243408324340832451171710Streptomyces sp. SirexAA-E chromosome, complete genomeRelaxase/mobilization nuclease family protein1e-32141
NC_013929:5431954:5431954543195454336691716Streptomyces scabiei 87.22 chromosome, complete genomemobilisation relaxase component1e-31138
NC_021177:3598700:3616887361688736186381752Streptomyces fulvissimus DSM 40593, complete genomePutative mobilization relaxase component2e-31138
NC_014008:3296708:3309807330980733113091503Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeATP-binding region ATPase domain protein5e-30133
NC_009138:1843998:1859376185937618606831308Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative ATPase domain6e-29129
NC_018750:6132619:6141012614101261427211710Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-28128
NC_003888:7659639:7681180768118076829221743Streptomyces coelicolor A3(2), complete genomehypothetical protein4e-27123
NC_012490:4425456:4438342443834244398591518Rhodococcus erythropolis PR4, complete genomehypothetical protein1e-26122
NC_016906:181254:1956811956811971891509Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative ATP-binding protein1e-25118
NC_016906:3980122:3999338399933840007861449Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative ATP-binding protein7e-24112
NC_014814:859124:8768268768268783401515Mycobacterium sp. Spyr1 chromosome, complete genomeDNA mismatch repair enzyme ( ATPase)9e-24112
NC_009380:636000:6445806445806460941515Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein9e-24112
NC_014666:8198554:8211524821152482130711548Frankia sp. EuI1c chromosome, complete genomeATP-binding region ATPase domain protein2e-23110
NC_019673:8161242:8175023817502381766331611Saccharothrix espanaensis DSM 44229 complete genomeATPase9e-23108
NC_009142:1701000:1714338171433817158401503Saccharopolyspora erythraea NRRL 2338, complete genomeATPase3e-21104
NC_008435:2368000:2405755240575524073561602Rhodopseudomonas palustris BisA53, complete genomehypothetical protein2e-1894.7
NC_013947:6585847:6591619659161965931631545Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRelaxase/mobilization nuclease family protein6e-1892.8
NC_014820:582443:5923785923785940961719Cenarchaeum symbiosum A, complete genomeDNA mismatch repair enzyme7e-1892.8
NC_009483:2854500:2863433286343328651331701Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein9e-1789.4
NC_013093:626473:6573886573886592771890Actinosynnema mirum DSM 43827, complete genomehypothetical protein3e-1687.8
NC_007492:857428:8709298709298726561728Pseudomonas fluorescens PfO-1, complete genomehypothetical protein2e-1584.7
NC_015564:2870631:2886293288629328881221830Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomehypothetical protein2e-1481.3
NC_013947:326980:3334093334093349411533Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein5e-1480.1
NC_013929:3722867:3764351376435137662191869Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1379
NC_003155:4592000:4610608461060846123561749Streptomyces avermitilis MA-4680, complete genomehypothetical protein2e-1378.2
NC_014549:14000:2803728037297461710Arthrobacter arilaitensis Re117 plasmid pRE117-1, completemobilisation protein4e-1273.6
NC_014550:3316115:3364555336455533660571503Arthrobacter arilaitensis Re117, complete genomeputative mobilisation protein1e-1172
NC_018866:2484500:2495934249593424977151782Dehalobacter sp. DCA chromosome, complete genomeDNA mismatch repair enzyme (predicted ATPase)2e-1171.2
NC_011593:1202726:122327412232741223726453Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,7e-1169.3
NC_008537:12500:2593125931275711641Arthrobacter sp. FB24 plasmid 1, complete sequenceRelaxase/mobilization nuclease family protein2e-0758.2
NC_008435:2368000:2403533240353324054611929Rhodopseudomonas palustris BisA53, complete genomehypothetical protein7e-0756.2
NC_008596:1302000:1311730131173013133161587Mycobacterium smegmatis str. MC2 155, complete genomehypothetical protein1e-0655.5
NC_018750:6070260:609980760998076100661855Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein4e-0653.5