Pre_GI: BLASTP Hits

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Query: NC_016582:7033000:7046258 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 7046258, End: 7048267, Length: 2010

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:3052494:3069222306922230712312010Streptomyces cattleya NRRL 8057, complete genomeAIPR protein01108
NC_016109:3963189:3975770397577039777792010Kitasatospora setae KM-6054, complete genomehypothetical protein0929
NC_013757:780835:7944477944477965012055Geodermatophilus obscurus DSM 43160, complete genomeAbortive phage infection0645
NC_009380:636000:6425536425536445381986Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein4e-148525
NC_014507:2174500:2186235218623521883552121Methanoplanus petrolearius DSM 11571 chromosome, complete genomeabortive phage infection2e-121436
NC_009464:650997:6595186595186613411824Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein4e-115416
NC_008095:4189082:4203223420322342052952073Myxococcus xanthus DK 1622, complete genomehypothetical protein2e-114413
NC_013061:1052957:1092202109220210942202019Pedobacter heparinus DSM 2366, complete genomehypothetical protein2e-95350
NC_015510:3273308:3280350328035032826952346Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeabortive phage infection protein5e-88325
NC_011989:2262881:2284711228471122868102100Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein1e-83311
NC_015138:5046921:5061614506161450633951782Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeabortive phage infection protein2e-83310
NC_014311:1:1582015820175951776Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein1e-82308
NC_009848:720510:7331147331147348831770Bacillus pumilus SAFR-032, complete genomehypothetical protein3e-80300
NC_012968:2000218:2018945201894520209812037Methylotenera mobilis JLW8, complete genomehypothetical protein4e-77289
NC_009138:1843998:1853676185367618554871812Herminiimonas arsenicoxydans, complete genomehypothetical protein1e-76288
NC_008700:312099:3270463270463288541809Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein2e-76287
NC_015147:9761:1622116221183142094Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE302, completehypothetical protein5e-73276
NC_020908:1889759:1901494190149419032991806Octadecabacter arcticus 238, complete genomehypothetical protein3e-68259
NC_008686:2080770:2092962209296220947641803Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein1e-66254
NC_007969:2885249:2912247291224729143672121Psychrobacter cryohalolentis K5, complete genomehypothetical protein2e-66254
NC_015497:4683741:4692145469214546942622118Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeAbortive phage infection9e-61235
NC_015846:24771:2809528095302122118Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein2e-59230
NC_017190:3812065:3825056382505638268671812Bacillus amyloliquefaciens LL3 chromosome, complete genomeAIPR protein4e-56219
NC_014551:3797047:3810034381003438118451812Bacillus amyloliquefaciens DSM 7, complete genomeAIPR protein4e-56219
NC_016641:2587000:2599383259938326012241842Paenibacillus terrae HPL-003 chromosome, complete genomeAIPR protein1e-55218
NC_019842:3755275:3790482379048237922931812Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,AIPR protein2e-54214
NC_014010:1392536:1429907142990714309741068Candidatus Puniceispirillum marinum IMCC1322 chromosome, completehypothetical protein1e-53211
NC_015152:1602412:1610976161097616131232148Spirochaeta sp. Buddy chromosome, complete genomeAbortive phage infection protein1e-53211
NC_014008:3296708:3303789330378933056871899Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeAbortive phage infection4e-48193
NC_011566:4709672:4722323472232347241761854Shewanella piezotolerans WP3, complete genomehypothetical protein2e-46187
NC_014010:1392536:1428925142892514299351011Candidatus Puniceispirillum marinum IMCC1322 chromosome, completehypothetical protein4e-28126
NC_008022:35983:5031450314520111698Streptococcus pyogenes MGAS10270, complete genomehypothetical protein2e-1585.1
NC_009801:1756610:1766746176674617685211776Escherichia coli E24377A, complete genomehypothetical protein5e-1480.1
NC_014844:903877:9145849145849162841701Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeAbortive phage infection1e-1379
NC_016845:1773416:1782946178294617846881743Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-1275.9
NC_009053:1895485:1907178190717819088691692Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein2e-1274.3
NC_014644:1532500:1532741153274115344471707Gardnerella vaginalis ATCC 14019 chromosome, complete genomehypothetical protein4e-1273.6
NC_013235:2902617:2933177293317729348411665Nakamurella multipartita DSM 44233, complete genomehypothetical protein3e-1170.9
NC_011060:330437:3286413286413304401800Pelodictyon phaeoclathratiforme BU-1, complete genomehypothetical protein4e-1067
NC_011420:69843:8250782507841711665Rhodospirillum centenum SW, complete genomehypothetical protein6e-1066.6
NC_016582:4874500:4901191490119149032962106Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0965.1
NC_007514:335085:3462403462403481261887Chlorobium chlorochromatii CaD3, complete genomehypothetical protein2e-0965.1
NC_007778:2875973:2882450288245028841681719Rhodopseudomonas palustris HaA2, complete genomehypothetical protein3e-0963.9
NC_012803:2454380:2463637246363724652861650Micrococcus luteus NCTC 2665, complete genomehypothetical protein1e-0862.4
NC_015422:1876102:1887402188740218891921791Alicycliphilus denitrificans K601 chromosome, complete genomeabortive phage infection protein2e-0861.6
NC_014815:6616500:6662065666206566641612097Micromonospora sp. L5 chromosome, complete genomeabortive phage infection2e-0861.2
NC_015731:1:82538253100581806Nitrosomonas sp. Is79A3 chromosome, complete genomeAbortive phage infection protein4e-0860.5
NC_012796:77071:8461484614863111698Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-0758.5
NC_007434:3973145:3986293398629339880441752Burkholderia pseudomallei 1710b chromosome I, complete sequencepossible abortive infection phage resistance protein, putative2e-0758.2
NC_010556:2328303:2337655233765523394421788Exiguobacterium sibiricum 255-15, complete genomehypothetical protein3e-0757.8
NC_011830:3025437:3034193303419330361721980Desulfitobacterium hafniense DCB-2, complete genomehypothetical protein3e-0757.4
NC_009012:1934107:1958009195800919597931785Clostridium thermocellum ATCC 27405, complete genomehypothetical protein1e-0655.5
NC_015953:2349503:2368128236812823702782151Streptomyces sp. SirexAA-E chromosome, complete genomeabortive phage infection2e-0654.7
NC_007404:974461:9917769917769935391764Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein3e-0654.3