Pre_GI: BLASTP Hits

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Query: NC_016582:5769080:5774842 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 5774842, End: 5775060, Length: 219

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016582:5769080:577462457746245774845222Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein7e-26115
NC_016582:6509792:652341965234196523631213Streptomyces bingchenggensis BCW-1 chromosome, complete genomeregulatory protein5e-1579.7
NC_016582:4983222:499046449904644990679216Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein8e-1165.9
NC_016111:3577572:358421535842153584427213Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-1065.5
NC_016582:7699420:771727277172727717478207Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein6e-1062.8
NC_016113:1143580:115295911529591153168210Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein4e-0960.5
NC_015953:3313000:332841433284143328632219Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein2e-0858.2
NC_016887:4403872:441580044158004416006207Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein2e-0857.8
NC_021177:2309615:232333723233372323546210Streptomyces fulvissimus DSM 40593, complete genomehypothetical protein2e-0857.4
NC_007777:461500:470346470346470555210Frankia sp. CcI3, complete genomeprotein of unknown function DUF3975e-0856.2
NC_016582:6999074:701116670111667011363198Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein9e-0855.8
NC_016887:511034:519978519978520184207Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein1e-0755.5
NC_016887:5988878:599565059956505995853204Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein2e-0754.7
NC_016113:1143580:115333311533331153542210Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein2e-0754.7
NC_021177:2309615:232169023216902321899210Streptomyces fulvissimus DSM 40593, complete genomehypothetical protein3e-0753.9
NC_016582:9664000:967362796736279673845219Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-0753.9
NC_016111:1546505:156251615625161562761246Streptomyces cattleya NRRL 8057, complete genomehypothetical protein5e-0753.1
NC_016887:55000:709557095571167213Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein6e-0752.8
NC_021177:2309615:232298223229822323224243Streptomyces fulvissimus DSM 40593, complete genomehypothetical protein7e-0752.8
NC_006361:498305:507996507996508202207Nocardia farcinica IFM 10152, complete genomehypothetical protein1e-0652
NC_013595:8553904:856210985621098562315207Streptosporangium roseum DSM 43021, complete genomehypothetical protein1e-0652
NC_015434:3755560:376751837675183767712195Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein1e-0652
NC_016582:3763476:377244737724473772656210Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0651.2
NC_016111:1484424:148874914887491489009261Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-0651.2
NC_016111:3577572:358445135844513584663213Streptomyces cattleya NRRL 8057, complete genomehypothetical protein4e-0650.1
NC_009380:4184695:419084941908494191037189Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein5e-0650.1
NC_003155:6295078:630326863032686303480213Streptomyces avermitilis MA-4680, complete genomehypothetical protein5e-0649.7
NC_009953:1581088:159174815917481591939192Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein6e-0649.7