Pre_GI: BLASTP Hits

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Query: NC_016582:4983222:4983222 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 4983222, End: 4987082, Length: 3861

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010981:425387:4318834318834397457863Wolbachia pipientis, complete genomeankyrin and tpr repeat domain protein4e-1274.7
NC_003888:6103534:6128360612836061310202661Streptomyces coelicolor A3(2), complete genomeATP /GTP-binding protein2e-60235
NC_003888:5042283:5055828505582850587282901Streptomyces coelicolor A3(2), complete genomeATP/GTP binding protein4e-68260
NC_016582:4983222:4994103499410349962472145Streptomyces bingchenggensis BCW-1 chromosome, complete genomeATP/GTP-binding protein3e-1068.9
NC_016582:5769080:5782633578263357847442112Streptomyces bingchenggensis BCW-1 chromosome, complete genomeATP/GTP-binding protein2e-1379.3
NC_007333:430000:4499244499244544954572Thermobifida fusca YX, complete genomehypothetical protein5e-62240
NC_013510:1849751:1855024185502418591754152Thermomonospora curvata DSM 43183, complete genomehypothetical protein6e-58227
NC_019673:3041936:3051529305152930527791251Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-30134
NC_017186:5586328:5601422560142256038362415Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein6e-22107
NC_014318:5586287:5597499559749955986741176Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein1e-20102
NC_003272:4621554:4636981463698146391132133Nostoc sp. PCC 7120, complete genomehypothetical protein2e-0965.5
NC_003888:8594500:859883085988308599405576Streptomyces coelicolor A3(2), complete genomehypothetical protein3e-0862
NC_015577:676453:6911066911066952424137Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein1e-0656.2
NC_014666:3629696:3637375363737536396542280Frankia sp. EuI1c chromosome, complete genomehypothetical protein4e-46187
NC_006363:36959:4500745007476552649Nocardia farcinica IFM 10152 plasmid pNF2, complete sequencehypothetical protein1e-32142
NC_014318:5586287:5601209560120956037942586Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein3e-22108
NC_017186:5586328:5597540559754055987151176Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein1e-20102
NC_016025:807226:8105628105628139033342Candidatus Chloracidobacterium thermophilum B chromosome chromosomehypothetical protein2e-0965.9
NC_009973:178000:2127392127392139171179Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completehypothetical protein8e-0963.9
NC_017186:5586328:5599527559952756009391413Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein2e-0862.4
NC_012491:3736167:3766116376611637695353420Brevibacillus brevis NBRC 100599, complete genomehypothetical protein6e-28127
NC_013595:3541012:3559577355957735619822406Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-1688.6
NC_014033:395000:4039554039554072753321Prevotella ruminicola 23 chromosome, complete genomehypothetical protein9e-1480.5
NC_013947:460398:4685274685274715803054Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein1e-0966.2
NC_014033:395000:4073204073204097792460Prevotella ruminicola 23 chromosome, complete genomehypothetical protein8e-0963.9
NC_010572:33724:4832848328503041977Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-0863.2
NC_016582:10326938:103454851034548510346480996Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-0759.7
NC_019673:1275627:1306946130694613101193174Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-0654.3
NC_014666:1601972:1620253162025316265196267Frankia sp. EuI1c chromosome, complete genomehypothetical protein2e-1689
NC_010830:1038292:1038292103829210419303639Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-0964.3
NC_010572:8493946:8495626849562684976021977Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-0863.2
NC_005125:2366778:2384287238428723873163030Gloeobacter violaceus PCC 7421, complete genomehypothetical protein3e-0862
NC_006361:1547034:1557575155757515603552781Nocardia farcinica IFM 10152, complete genomehypothetical protein3e-0758.5
NC_008278:3601959:3614846361484636180523207Frankia alni ACN14a, complete genomehypothetical protein; putative P-loop containing nucleotide triphosphate hydrolases and TIR domains4e-29131
NC_013161:1801904:1803292180329218053102019Cyanothece sp. PCC 8802, complete genomeNB-ARC domain protein1e-0863.5
NC_014666:7838500:7846062784606278490703009Frankia sp. EuI1c chromosome, complete genomeNB-ARC domain protein2e-47191
NC_013510:1849751:1862641186264118651722532Thermomonospora curvata DSM 43183, complete genomeNB-ARC domain protein2e-79298
NC_013757:3651646:3667190366719036695712382Geodermatophilus obscurus DSM 43160, complete genomeNB-ARC domain protein2e-1482.8
NC_013093:3068486:3110811311081131133272517Actinosynnema mirum DSM 43827, complete genomeNB-ARC domain protein3e-0655.5
NC_014318:8687448:8690850869085086945303681Amycolatopsis mediterranei U32 chromosome, complete genomeNB-ARC domain-containing protein1e-79299
NC_017186:8683964:8690906869090686945863681Amycolatopsis mediterranei S699 chromosome, complete genomeNB-ARC domain-containing protein1e-79299
NC_018531:1900619:1912565191256519151142550Arthrobacter sp. Rue61a chromosome, complete genomenephrocystin4e-1791.3
NC_008312:5386630:5391012539101253949983987Trichodesmium erythraeum IMS101, complete genomepeptidase-like1e-1276.6
NC_013757:1438812:1458928145892814615072580Geodermatophilus obscurus DSM 43160, complete genomeputative ATP/GTP binding protein2e-65251
NC_013757:1212308:1230217123021712331952979Geodermatophilus obscurus DSM 43160, complete genomeputative ATP/GTP binding protein8e-60233
NC_009921:5681677:5687555568755556895822028Frankia sp. EAN1pec, complete genomeputative ATP/GTP binding protein2e-40169
NC_007777:1018824:1018824101882410216282805Frankia sp. CcI3, complete genomeputative ATP/GTP binding protein8e-52206
NC_008278:514600:5337995337995363272529Frankia alni ACN14a, complete genomeputative ATP/GTP binding protein4e-41171
NC_014666:1805806:1827973182797318308462874Frankia sp. EuI1c chromosome, complete genomesigma-70 region 2 domain protein3e-42174
NC_005125:4283345:4291713429171342932451533Gloeobacter violaceus PCC 7421, complete genomesimilar to kinesin light chain7e-0757.4
NC_005125:4283345:4289005428900542917282724Gloeobacter violaceus PCC 7421, complete genomesimilar to kinesin light chain7e-21103
NC_014391:6749156:6766968676696867694152448Micromonospora aurantiaca ATCC 27029 chromosome, complete genometetratricopeptide domain-containing protein4e-1894.7
NC_014623:3029853:3047421304742130520314611Stigmatella aurantiaca DW4/3-1 chromosome, complete genometetratricopeptide repeat-containing protein3e-0758.9
NC_014315:2177277:2185590218559021881692580Nitrosococcus watsoni C-113 chromosome, complete genometetratricopeptide repeat-containing protein2e-1069.3
NC_014623:1829000:1844588184458818477163129Stigmatella aurantiaca DW4/3-1 chromosome, complete genometetratricopeptide repeat-containing protein2e-0759.3
NC_008312:1725763:1731395173139517359184524Trichodesmium erythraeum IMS101, complete genomeTetratricopeptide TPR_24e-0758.2
NC_011726:1827000:1827925182792518302282304Cyanothece sp. PCC 8801, complete genomeTetratricopeptide TPR_2 repeat protein9e-1067
NC_013131:7889127:7901223790122379056294407Catenulispora acidiphila DSM 44928, complete genomeTetratricopeptide TPR_48e-0653.9
NC_009921:6421387:6433394643339464345511158Frankia sp. EAN1pec, complete genomeTIR protein2e-1792.4
NC_011060:1538375:1551720155172015555713852Pelodictyon phaeoclathratiforme BU-1, complete genomeTPR repeat-containing protein1e-1690.1
NC_009974:53865:5386553865567262862Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02, completeTPR repeat-containing protein8e-1584
NC_015434:666692:6780696780696803542286Verrucosispora maris AB-18-032 chromosome, complete genomeTPR repeat-containing protein4e-1378.2
NC_009974:53865:7785377853804262574Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02, completeTPR repeat-containing protein5e-1584.7
NC_009973:178000:2139952139952173123318Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeTPR repeat-containing protein1e-20103
NC_013757:900500:9101879101879131893003Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, SARP family7e-60233