Pre_GI: BLASTP Hits

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Query: NC_016582:3763476:3778386 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 3778386, End: 3779441, Length: 1056

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009142:3943829:3951736395173639527851050Saccharopolyspora erythraea NRRL 2338, complete genomelipoate-protein ligase A3e-126451
NC_014830:1871135:1892701189270118937501050Intrasporangium calvum DSM 43043 chromosome, complete genomebiotin/lipoate A/B protein ligase3e-121434
NC_013524:1207845:121290312129031213685783Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeLipoate--protein ligase6e-75281
NC_015865:1468689:147360514736051474354750Thermococcus sp. 4557 chromosome, complete genomelipoate-protein ligase A1e-27124
NC_009464:379377:404160404160404900741Uncultured methanogenic archaeon RC-I, complete genomelipoate-protein ligase A, C-terminal fragment3e-26119
NC_013524:1207845:121368212136821213957276Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomebiotin/lipoate A/B protein ligase4e-24112
NC_014160:719408:745001745001745756756Thermosphaera aggregans DSM 11486 chromosome, complete genomelipoate--protein ligase1e-23110
NC_007644:416000:4434024434024449941593Moorella thermoacetica ATCC 39073, complete genomeBiotin/lipoate A/B protein ligase7e-23108
NC_013517:3997448:400528440052844006273990Sebaldella termitidis ATCC 33386, complete genomelipoyltransferase and lipoate-protein ligase2e-1893.6
NC_012004:1053682:106966810696681070657990Streptococcus uberis 0140J, complete genomelipoate-protein ligase A3e-1893.2
NC_007929:165518:1820981820981831171020Lactobacillus salivarius subsp. salivarius UCC118, complete genomeLipoate-protein ligase A4e-1892.4
NC_019792:2416000:243466024346602435505846Natronobacterium gregoryi SP2 chromosome, complete genomelipoate-protein ligase A7e-1891.7
NC_008346:2251353:225237622523762253374999Syntrophomonas wolfei subsp. wolfei str. Goettingen, completelipoate-protein ligase3e-1789.7
NC_013515:1321336:132816213281621329151990Streptobacillus moniliformis DSM 12112, complete genomelipoyltransferase and lipoate-protein ligase8e-1788.2
NC_007530:1068000:107015410701541071143990Bacillus anthracis str. 'Ames Ancestor', complete genomelipoate-protein ligase a, putative1e-1687.8
NC_003997:1068000:107015410701541071143990Bacillus anthracis str. Ames, complete genomelipoate-protein ligase A, putative1e-1687.8
NC_007793:1633080:164704416470441647874831Staphylococcus aureus subsp. aureus USA300, complete genomehypothetical protein9e-1684.7
NC_018866:154252:158749158749159738990Dehalobacter sp. DCA chromosome, complete genomeLipoate-protein ligase A2e-1583.6
NC_009495:1759759:177394417739441774939996Clostridium botulinum A str. ATCC 3502 chromosome, complete genomelipoate-protein ligase A3e-1582.8
NC_009089:873295:896589896589897404816Clostridium difficile 630, complete genomeputative biotin/lipoate-protein ligase3e-1582.8
NC_013316:796895:820177820177820992816Clostridium difficile R20291, complete genomeputative biotin/lipoate-protein ligase3e-1582.8
NC_013315:796313:822637822637823452816Clostridium difficile CD196 chromosome, complete genomebiotin/lipoate-protein ligase3e-1582.8
NC_017179:805867:832191832191833006816Clostridium difficile BI1, complete genomeputative biotin/lipoate-protein ligase3e-1582.8
NC_016641:3173250:3175652317565231766531002Paenibacillus terrae HPL-003 chromosome, complete genomelipoyltransferase and lipoate-protein ligase5e-1582.4
NC_014483:1376500:1378623137862313796241002Paenibacillus polymyxa E681 chromosome, complete genomeLipoate-protein ligase A7e-1581.6
NC_014622:1514416:1516427151642715174281002Paenibacillus polymyxa SC2 chromosome, complete genomelipoyltransferase and lipoate-protein ligase9e-1581.3
NC_003106:1879441:1896872189687218979061035Sulfolobus tokodaii str. 7, complete genomehypothetical protein5e-1479
NC_003106:1175000:119556311955631196285723Sulfolobus tokodaii str. 7, complete genomehypothetical protein5e-1479
NC_010001:1884500:189302018930201894018999Clostridium phytofermentans ISDg, complete genomelipoyltransferase and lipoate-protein ligase6e-1478.6
NC_018866:154252:164887164887165879993Dehalobacter sp. DCA chromosome, complete genomeLipoate-protein ligase A5e-1375.5
NC_018870:1953748:197293119729311973920990Thermacetogenium phaeum DSM 12270 chromosome, complete genomelipoate-protein ligase A7e-1375.1
NC_002967:1589069:159462815946281595623996Treponema denticola ATCC 35405, complete genomelipoyltransferase and lipoate-protein ligase family protein2e-1273.9
NC_016633:1353458:135422713542271355189963Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomelipoyltransferase and lipoate-protein ligase3e-1272.8
NC_010163:1361217:136505813650581365975918Acholeplasma laidlawii PG-8A chromosome, complete genomelipoate-protein ligase A5e-1272.4
NC_014751:302152:3190723190723200761005Mycoplasma leachii PG50 chromosome, complete genomelipoyltransferase and lipoate-protein ligase8e-1271.6
NC_007633:253143:2708242708242718281005Mycoplasma capricolum subsp. capricolum ATCC 27343, completelipoate-protein ligase8e-1271.6
NC_014921:22828:390393903940022984Mycoplasma fermentans M64 chromosome, complete genomelipoate-protein ligase a2e-1170.5
NC_006138:2379332:2382979238297923839951017Desulfotalea psychrophila LSv54, complete genomelipoate-protein ligase2e-1170.5
NC_006139:31500:4287942879438951017Desulfotalea psychrophila LSv54 plasmid large, complete sequencePredicted orf2e-1170.1
NC_019968:552440:568623568623569333711Prevotella dentalis DSM 3688 chromosome 2, complete sequencelipoate-protein ligase A5e-1168.9
NC_006055:44649:5265852658536621005Mesoplasma florum L1, complete genomelipoate-protein ligase6e-1168.6
NC_014973:595153:596755596755597555801Geobacter sp. M18 chromosome, complete genomebiotin/lipoate A/B protein ligase1e-1067.8
NC_015518:1518047:151908515190851519960876Acidianus hospitalis W1 chromosome, complete genomebiotin/lipoate A/B protein ligase2e-1066.6
NC_011047:255208:2760022760022770151014Candidatus Phytoplasma mali, complete genomeLipoate-protein ligase A3e-1066.6
NC_009778:3287693:3307394330739433084101017Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-0962.8
NC_009663:982048:985341985341986144804Sulfurovum sp. NBC37-1, complete genomelipoate protein ligase3e-0962.8
NC_020260:3277007:3298303329830332993191017Cronobacter sakazakii Sp291, complete genomelipoate-protein ligase A5e-0962.4
NC_007517:3524715:354648335464833547325843Geobacter metallireducens GS-15, complete genomeBiotin/lipoate A/B protein ligase6e-0962
NC_015499:1167932:118473711847371185525789Thermodesulfobium narugense DSM 14796 chromosome, complete genomebiotin/lipoate A/B protein ligase2e-0860.5
NC_014148:3368519:338644533864453387206762Planctomyces limnophilus DSM 3776 chromosome, complete genomebiotin/lipoate A/B protein ligase2e-0860.1
NC_014618:4010689:4033694403369440347101017Enterobacter cloacae SCF1 chromosome, complete genomelipoyltransferase and lipoate-protein ligase3e-0859.7
NC_000918:1353310:1372613137261313736501038Aquifex aeolicus VF5, complete genomehypothetical protein4e-0859.3
NC_014500:2934232:2954688295468829557041017Dickeya dadantii 3937 chromosome, complete genomeLipoate-protein ligase A5e-0859.3
NC_017047:3085000:309156130915613092487927Rahnella aquatilis HX2 chromosome, complete genomelipoate-protein ligase A1e-0757.8