Pre_GI: BLASTP Hits

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Query: NC_016582:3763476:3773745 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 3773745, End: 3774215, Length: 471

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:4003290:401778740177874018248462Streptomyces cattleya NRRL 8057, complete genomehypothetical protein5e-1993.6
NC_003155:210240:2228712228712246911821Streptomyces avermitilis MA-4680, complete genomehypothetical protein2e-1064.3
NC_016109:4581467:459704245970424597479438Kitasatospora setae KM-6054, complete genomehypothetical protein3e-1064.3
NC_013093:3768790:377299837729983773411414Actinosynnema mirum DSM 43827, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase4e-1063.9
NC_018750:6588206:660790366079036608355453Streptomyces venezuelae ATCC 10712, complete genomeprobable regulatory protein4e-1063.9
NC_013929:5431954:543593854359385436402465Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein7e-1063.2
NC_010572:8352462:8359316835931683606231308Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-0962
NC_016109:5768000:580196058019605802550591Kitasatospora setae KM-6054, complete genomehypothetical protein3e-0960.8
NC_016111:1546505:156117815611781561573396Streptomyces cattleya NRRL 8057, complete genomeRegulatory protein (fragment)9e-0959.3
NC_010572:4505428:451288745128874513312426Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative regulatory protein containing a conserved C-terminal domain1e-0858.5
NC_013595:8338619:834591383459138346320408Streptosporangium roseum DSM 43021, complete genome2e-0858.5
NC_014165:2888961:290422029042202904699480Thermobispora bispora DSM 43833 chromosome, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase2e-0858.5
NC_016113:887582:896879896879897598720Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein6e-0856.6
NC_003888:7337453:735676673567667357356591Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-0755.1
NC_013929:6343000:635622163562216356853633Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-0754.7
NC_016114:907500:922845922845923339495Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeATP-binding region ATPase domain-containing protein3e-0754.3
NC_013510:3065000:308386530838653084233369Thermomonospora curvata DSM 43183, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase5e-0753.5
NC_016582:1639375:1662621166262116654342814Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative regulatory protein phosphatase1e-0652.4
NC_018750:3859127:3872413387241338745302118Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-0652
NC_003888:7706226:771280577128057713266462Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-0652
NC_016582:6999074:701240870124087013058651Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0651.6
NC_016582:10015558:1002419110024191100262512061Streptomyces bingchenggensis BCW-1 chromosome, complete genomemagnesium or manganese-dependent protein phosphatase3e-0651.2
NC_014165:27246:313863138632066681Thermobispora bispora DSM 43833 chromosome, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase3e-0651.2
NC_013510:4319296:433146443314644331904441Thermomonospora curvata DSM 43183, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase3e-0650.8
NC_016109:5290000:5311921531192153146922772Kitasatospora setae KM-6054, complete genomeputative protein kinase/phosphatase3e-0650.8