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Query: NC_016582:3763476:3765583 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 3765583, End: 3766185, Length: 603

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018681:7692560:771362577136257714212588Nocardia brasiliensis ATCC 700358 chromosome, complete genomeputative reductase5e-48190
NC_013510:5499447:553298455329845533544561Thermomonospora curvata DSM 43183, complete genomeNADPH-dependent FMN reductase3e-31134
NC_006361:3132000:314712031471203147710591Nocardia farcinica IFM 10152, complete genomeputative reductase1e-30132
NC_013510:810525:829139829139829702564Thermomonospora curvata DSM 43183, complete genomeNADPH-dependent FMN reductase1e-22106
NC_006177:1060428:107424510742451074829585Symbiobacterium thermophilum IAM 14863, complete genomeputative reductase2e-1685.5
NC_004757:1089057:109299310929931093550558Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein7e-1580.5
NC_007484:79413:959709597096542573Nitrosococcus oceani ATCC 19707, complete genomeNADPH-dependent FMN reductase6e-1580.5
NC_007777:4954306:496711549671154967456342Frankia sp. CcI3, complete genomeNADPH-dependent FMN reductase2e-1478.6
NC_015391:1323171:134202713420271342593567Carnobacterium sp. 17-4 chromosome, complete genomeoxidoreductase, NAD(P)H-FMN and ferric iron reductase7e-1477
NC_013595:1851226:185634518563451856911567Streptosporangium roseum DSM 43021, complete genomeputative reductase3e-1374.7
NC_014375:217612:220983220983221564582Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeNADPH-dependent FMN reductase1e-1169.3
NC_013521:345308:351557351557352120564Sanguibacter keddieii DSM 10542, complete genomepredicted flavoprotein4e-1168.2
NC_003888:8569962:8576308857630885773721065Streptomyces coelicolor A3(2), complete genomebifunctional protein1e-0963.2
NC_014391:2579919:260965926096592610219561Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeNADPH-dependent FMN reductase3e-0961.6
NC_010645:31500:399393993940496558Bordetella avium 197N, complete genomereductase5e-0960.8
NC_013169:2045000:205112720511272051705579Kytococcus sedentarius DSM 20547, complete genomepredicted flavoprotein6e-0857.4
NC_018524:4656786:4660979466097946620761098Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeacetyltransferase family protein6e-0857.4
NC_013929:9038500:903879590387959039784990Streptomyces scabiei 87.22 chromosome, complete genomereductase5e-0754.3
NC_010611:31976:459824598246524543Acinetobacter baumannii ACICU, complete genomepredicted flavoprotein2e-0652
NC_010410:3886500:389282538928253893367543Acinetobacter baumannii AYE, complete genomehypothetical protein3e-0652