Pre_GI: BLASTP Hits

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Query: NC_016582:2009588:2019090 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 2019090, End: 2019503, Length: 414

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015957:7301546:730644173064417307397957Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-64243
NC_015957:7348269:7384650738465073857621113Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-64243
NC_015957:7249873:727039172703917271188798Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit5e-64242
NC_016582:10227196:102563301025633010256902573Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region5e-64242
NC_016582:10159486:101839421018394210184514573Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-63239
NC_016582:11920331:1193134011931340119324521113Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region7e-62235
NC_016582:1639375:166180316618031662237435Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region7e-61231
NC_015957:7533000:754114375411437541877735Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-60230
NC_009921:522000:5221705221705232761107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region1e-35147
NC_009921:465683:4808934808934819991107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region5e-35145
NC_013131:621366:6389796389796400521074Catenulispora acidiphila DSM 44928, complete genomeIntegrase catalytic region6e-35145
NC_009921:3854969:3864152386415238652221071Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-34143
NC_009921:5331565:533156553315655332086522Frankia sp. EAN1pec, complete genomeIntegrase catalytic region1e-33141
NC_009921:4035225:4044349404434940454551107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-33140
NC_009921:1668306:1700587170058717016931107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-32137
NC_009921:3551036:3572412357241235735181107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-32137
NC_009921:4035225:403953840395384040437900Frankia sp. EAN1pec, complete genomeIntegrase catalytic region1e-29128
NC_016582:10326938:1032823310328233103292881056Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region7e-29125
NC_009921:522000:5538505538505549171068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region1e-28124
NC_009921:3551036:3568885356888535699521068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-28124
NC_009921:5202607:5221516522151652227031188Frankia sp. EAN1pec, complete genomeIntegrase catalytic region6e-28122
NC_016582:10326938:1033994510339945103410241080Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-27120
NC_009921:522000:5591945591945602611068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-27120
NC_009921:8549757:8553073855307385540741002Frankia sp. EAN1pec, complete genomeIntegrase catalytic region5e-27119
NC_009921:8147947:816043281604328161139708Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-26117
NC_009921:565947:5692265692265703051080Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-26117
NC_009921:8147947:8154281815428181553481068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region4e-26116
NC_009921:565947:576413576413576805393Frankia sp. EAN1pec, complete genomeputative transposase1e-25115
NC_009921:565947:580591580591580881291Frankia sp. EAN1pec, complete genomeputative transposase1e-24112
NC_019673:2051363:211413521141352115091957Saccharothrix espanaensis DSM 44229 complete genomeIntegrase, catalytic subunit5e-25112
NC_016582:10326938:103388221033882210339559738Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-24111
NC_016582:1707756:1726558172655817276251068Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-24111
NC_013131:7401253:741431574143157414974660Catenulispora acidiphila DSM 44928, complete genome2e-23107
NC_017186:6395435:646032164603216460869549Amycolatopsis mediterranei S699 chromosome, complete genomeintegrase3e-22103
NC_014318:6395392:646027764602776460825549Amycolatopsis mediterranei U32 chromosome, complete genomeputative integrase3e-22103
NC_016582:10326938:103342551033425510334638384Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transposase9e-2198.6
NC_016582:1707756:171886917188691719864996Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region6e-2095.9
NC_015957:7408466:7445734744573474468641131Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit9e-2095.5
NC_016582:10159486:102029131020291310203428516Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-1995.1
NC_016582:1751988:176704117670411767985945Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-1892
NC_013440:971717:983650983650984006357Haliangium ochraceum DSM 14365, complete genome2e-1891.3
NC_009921:4757148:478037547803754781085711Frankia sp. EAN1pec, complete genomehypothetical protein1e-1891.3
NC_016582:1639375:166690516669051667873969Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-1890.5
NC_009921:5202607:524333152433315243849519Frankia sp. EAN1pec, complete genomehypothetical protein4e-1890.1
NC_016582:1639375:1670249167024916713461098Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein7e-1889.4
NC_009921:5508000:5511758551175855127861029Frankia sp. EAN1pec, complete genomehypothetical protein7e-1889.4
NC_015957:7348269:738583073858307386612783Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1788.6
NC_013440:1131376:113753611375361138090555Haliangium ochraceum DSM 14365, complete genome2e-1788.2
NC_015957:7408466:7435711743571174368021092Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-1787.4
NC_013440:1580802:159211115921111592464354Haliangium ochraceum DSM 14365, complete genome3e-1787
NC_016582:1707756:172005317200531720457405Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase3e-1787
NC_016582:10227196:1026081410260814102618931080Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-1787
NC_009142:5698100:571334257133425713839498Saccharopolyspora erythraea NRRL 2338, complete genomeintegrase1e-1685.1
NC_016582:1639375:165253416525341652938405Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase2e-1684.7
NC_016582:10326938:1035565010355650103567411092Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit1e-1684.7
NC_013440:1480855:149309714930971493552456Haliangium ochraceum DSM 14365, complete genome2e-1684.3
NC_019673:3041936:304944930494493050132684Saccharothrix espanaensis DSM 44229 complete genomeIntegrase2e-1684.3
NC_015957:6859259:6867186686718668682681083Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit3e-1683.6
NC_019673:6362458:637392763739276374445519Saccharothrix espanaensis DSM 44229 complete genomeIntegrase9e-1682
NC_016582:11535695:115450311154503111545480450Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase6e-1579.7
NC_015957:7301546:7302863730286373038971035Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit6e-1579.7
NC_015957:7301546:7310381731038173114781098Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit6e-1579.3
NC_016582:11878078:118879981188799811888642645Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-1479
NC_015957:7249873:727166572716657272381717Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit1e-1478.2
NC_009921:565947:571902571902572147246Frankia sp. EAN1pec, complete genomeputative transposase2e-1477.4
NC_016582:1639375:166057716605771661089513Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase2e-1374.7
NC_016582:11734963:117419241174192411742577654Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit4e-1373.6
NC_015957:7348269:736766073676607368379720Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit4e-1373.2
NC_016582:10227196:102306371023063710231404768Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit6e-1372.8
NC_016582:10104458:101106331011063310110989357Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase1e-1272
NC_016582:1751988:175601217560121756560549Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-1271.6
NC_016582:11878078:1188672811886728118878011074Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-1271.6
NC_015957:7408466:743524374352437435677435Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-1271.2
NC_008576:3307297:3324318332431833253851068Magnetococcus sp. MC-1, complete genomehypothetical protein6e-1269.7
NC_015957:7348269:737365873736587373957300Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-1166.6
NC_015957:7348269:738261673826167382792177Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1065.5
NC_016582:10326938:103466781034667810347607930Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-1065.1
NC_013440:1349402:135811713581171358620504Haliangium ochraceum DSM 14365, complete genome4e-1063.5
NC_009921:5202607:523634252363425236638297Frankia sp. EAN1pec, complete genomehypothetical protein5e-1063.2
NC_008510:3189349:320197132019713202969999Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, IS1477-like6e-1062.8
NC_015957:7348269:738439173843917384720330Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein1e-0962
NC_008095:2117952:212093821209382121837900Myxococcus xanthus DK 1622, complete genomeputative transposase2e-0961.2
NC_009921:5202607:522033152203315220528198Frankia sp. EAN1pec, complete genomeputative transposase5e-0960.1
NC_016582:11878078:118930241189302411893827804Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region8e-0959.3
NC_016582:11734963:1174686611746866117479061041Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transposase7e-0856.2
NC_021184:4524500:452522845252284526019792Desulfotomaculum gibsoniae DSM 7213, complete genome8e-0855.8
NC_016582:1639375:167282616728261673122297Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase1e-0755.5
NC_009253:3272000:3283650328365032847441095Desulfotomaculum reducens MI-1 chromosome, complete genomeintegrase catalytic subunit2e-0754.3
NC_004342:3668371:367378736737873674737951Leptospira interrogans serovar Lai str. 56601 chromosome I,transposase3e-0753.9
NC_016582:10326938:103295081032950810329771264Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region9e-0752.4
NC_014212:3206860:3217167321716732182881122Meiothermus silvanus DSM 9946 chromosome, complete genomeIntegrase catalytic region5e-0649.7
NC_014212:319815:3239193239193250401122Meiothermus silvanus DSM 9946 chromosome, complete genomeIntegrase catalytic region5e-0649.7
NC_014212:2776457:2776457277645727775931137Meiothermus silvanus DSM 9946 chromosome, complete genomeIntegrase catalytic region9e-0648.9