Pre_GI: BLASTP Hits

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Query: NC_016582:2009588:2017776 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 2017776, End: 2018300, Length: 525

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014391:6710500:6733615673361567348501236Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS116/IS110/IS902 family protein5e-51200
NC_013929:66500:795437954380247705Streptomyces scabiei 87.22 chromosome, complete genomeIS transposase6e-46182
NC_008596:4152916:4155111415511141563221212Mycobacterium smegmatis str. MC2 155, complete genomeTransposase IS116/IS110/IS902 family protein2e-36151
NC_008596:3404832:3417007341700734182181212Mycobacterium smegmatis str. MC2 155, complete genomeTransposase IS116/IS110/IS902 family protein2e-36151
NC_008596:4043213:4053599405359940548101212Mycobacterium smegmatis str. MC2 155, complete genomeTransposase IS116/IS110/IS902 family protein5e-36150
NC_008726:6335961:6358190635819063594011212Mycobacterium vanbaalenii PYR-1, complete genometransposase, IS111A/IS1328/IS15333e-34144
NC_007777:3824291:3834868383486838361421275Frankia sp. CcI3, complete genometransposase IS116/IS110/IS9023e-33141
NC_013131:9903320:9916715991671599179411227Catenulispora acidiphila DSM 44928, complete genometransposase IS111A/IS1328/IS15336e-33139
NC_014830:13179:3461634616358181203Intrasporangium calvum DSM 43043 chromosome, complete genometransposase IS116/IS110/IS902 family protein7e-32136
NC_009921:3473854:3524959352495935261821224Frankia sp. EAN1pec, complete genometransposase IS111A/IS1328/IS15337e-25113
NC_016816:4129299:4148820414882041500581239Pantoea ananatis LMG 5342, complete genometransposase, IS110 family2e-1892
NC_015312:1191633:1214360121436012155921233Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15333e-1890.9
NC_014500:1862000:190038819003881900963576Dickeya dadantii 3937 chromosome, complete genomeISEch13 OrfAB7e-1890.1
NC_012803:1302261:1311276131127613125021227Micrococcus luteus NCTC 2665, complete genometransposase7e-1890.1
NC_016818:2836851:2866484286648428677221239Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetransposase IS116/IS110/IS902 family6e-1890.1
NC_014500:3097362:3160534316053431618111278Dickeya dadantii 3937 chromosome, complete genomeISEch11 transposase8e-1889.7
NC_015061:2927707:2933995293399529352331239Rahnella sp. Y9602 chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-1789
NC_002944:2373873:2388971238897123901911221Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein5e-1684
NC_002944:1881405:1882374188237418835941221Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein5e-1684
NC_009436:1679265:1682380168238016836181239Enterobacter sp. 638, complete genometransposase IS116/IS110/IS902 family protein6e-1683.6
NC_017047:2042346:2063312206331220645381227Rahnella aquatilis HX2 chromosome, complete genometransposase8e-1683.2
NC_016111:1904859:1908978190897819102791302Streptomyces cattleya NRRL 8057, complete genomehypothetical protein7e-1683.2
NC_010718:193231:1932311932311944301200Natranaerobius thermophilus JW/NM-WN-LF, complete genometransposase IS111A/IS1328/IS15331e-1582.4
NC_015573:813000:8374418374418386491209Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS111A/IS1328/IS15333e-1581.3
NC_015573:2187688:2193348219334821945561209Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS111A/IS1328/IS15333e-1581.3
NC_010612:4654936:4671921467192146731261206Mycobacterium marinum M, complete genometransposase4e-1580.9
NC_016612:5231065:5253880525388052551091230Klebsiella oxytoca KCTC 1686 chromosome, complete genometransposase, IS110 family protein3e-1580.9
NC_014218:1163513:1178727117872711799261200Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-1479
NC_015848:3175692:3179509317950931807651257Mycobacterium canettii CIPT 140010059, complete genometransposase2e-1478.6
NC_019950:3139865:3144184314418431454401257Mycobacterium canettii CIPT 140060008 complete genomeTransposase2e-1478.6
NC_013131:3473843:3476181347618134773801200Catenulispora acidiphila DSM 44928, complete genometransposase IS116/IS110/IS902 family protein1e-1376.3
NC_015312:1265797:1280848128084812820591212Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15331e-1375.9
NC_003888:7028165:7057809705780970590261218Streptomyces coelicolor A3(2), complete genomeIS110 transposase/integrase1e-1375.9
NC_003888:8594500:8609130860913086103471218Streptomyces coelicolor A3(2), complete genomeprobable IS110 transposase1e-1375.9
NC_007164:622000:6289516289516301621212Corynebacterium jeikeium K411, complete genometransposase for IS3510d3e-1374.3
NC_015312:61752:7224072240734421203Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-1272.4
NC_007164:1839154:1859120185912018603281209Corynebacterium jeikeium K411, complete genometransposase for IS3512c1e-1272.4
NC_008271:119957:1199571199571211321176Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable transposase2e-1271.6
NC_008703:31500:4552345523467281206Mycobacterium sp. KMS plasmid pMKMS01, complete sequencetransposase IS116/IS110/IS902 family protein3e-1270.9
NC_014811:166389:1674631674631686681206Mycobacterium sp. Spyr1 plasmid pMSPYR101, complete sequencetransposase3e-1270.9
NC_008703:31500:3294732947341521206Mycobacterium sp. KMS plasmid pMKMS01, complete sequencetransposase IS116/IS110/IS902 family protein3e-1270.9
NC_016582:10326938:1033242710332427103336231197Streptomyces bingchenggensis BCW-1 chromosome, complete genomeIS116/IS110/IS902 family transposase5e-1270.5
NC_013929:1584906:1597557159755715987591203Streptomyces scabiei 87.22 chromosome, complete genometransposase5e-1270.5
NC_009142:5647737:564935756493575649965609Saccharopolyspora erythraea NRRL 2338, complete genomeputative IS110 transposase/integrase6e-1270.5
NC_016787:733685:7510667510667522741209Corynebacterium diphtheriae HC03 chromosome, complete genometransposase-like protein7e-1270.1
NC_015145:2693749:2712406271240627136081203Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometransposase7e-1270.1
NC_019673:2051363:2139699213969921409161218Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein9e-1269.7
NC_016799:731849:7454017454017466091209Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein9e-1269.7
NC_015145:3657103:3677666367766636788651200Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometransposase1e-1169.3
NC_008537:12500:1657316573178381266Arthrobacter sp. FB24 plasmid 1, complete sequencetransposase, IS111A/IS1328/IS15331e-1169.3
NC_016111:2952338:2959354295935429605501197Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-1168.9
NC_008537:12500:2948329483306761194Arthrobacter sp. FB24 plasmid 1, complete sequencetransposase IS116/IS110/IS902 family protein2e-1168.6
NC_014391:4617688:4619787461978746210101224Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-1168.6
NC_015673:525638:5298365298365310441209Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element3e-1168.2
NC_008699:4922465:4929169492916949306711503Nocardioides sp. JS614, complete genometransposase, IS111A/IS1328/IS15338e-1166.6
NC_015312:6398931:6398931639893164001631233Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15331e-1066.2
NC_009142:2725000:2743012274301227442291218Saccharopolyspora erythraea NRRL 2338, complete genometransposase IS116/IS110/IS902 family protein2e-1065.5
NC_002944:4163490:4183576418357641847841209Mycobacterium avium subsp. paratuberculosis K-10, complete genomeIS1110 transposase4e-1063.9
NC_016582:10159486:102085631020856310209084522Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transposase7e-1063.5
NC_013441:2788806:2820958282095828221811224Gordonia bronchialis DSM 43247, complete genometransposase IS111A/IS1328/IS15336e-1063.5
NC_003155:210240:2435812435812447711191Streptomyces avermitilis MA-4680, complete genomeIS110 family transposase1e-0962.4
NC_013929:3722867:3749514374951437506591146Streptomyces scabiei 87.22 chromosome, complete genometransposase2e-0962
NC_012586:425615:4426694426694438471179Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative transposase for insertion sequence NGRIS-14a3e-0961.2
NC_016787:1782951:179752217975221797899378Corynebacterium diphtheriae HC03 chromosome, complete genometransposase-like protein3e-0961.2
NC_018583:95388:985769857699028453Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTransposase-like protein4e-0960.8
NC_014666:1601972:1613788161378816149841197Frankia sp. EuI1c chromosome, complete genometransposase IS116/IS110/IS902 family protein5e-0960.5
NC_014666:1844882:1861075186107518622711197Frankia sp. EuI1c chromosome, complete genometransposase IS116/IS110/IS902 family protein5e-0960.5
NC_015312:4658548:4671793467179346731391347Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15335e-0960.5
NC_015673:2206881:2212642221264222138561215Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element8e-0960.1
NC_006087:2326143:2327614232761423288161203Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, undefined9e-0959.7
NC_010804:2206000:2216716221671622179211206Burkholderia multivorans ATCC 17616 chromosome 1, completeISBmu10 transposase1e-0859.3
NC_010087:319063:3418413418413430461206Burkholderia multivorans ATCC 17616 chromosome 3, completetransposase IS116/IS110/IS902 family protein1e-0859.3
NC_010801:550270:5818125818125830171206Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu10 transposase1e-0859.3
NC_010084:1299387:1306852130685213080571206Burkholderia multivorans ATCC 17616 chromosome 1, completetransposase IS116/IS110/IS902 family protein1e-0859.3
NC_014391:1967167:1997027199702719980701044Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-0858.9
NC_014391:1967167:2003289200328920043321044Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-0858.9
NC_012623:192455:201195201195202145951Sulfolobus islandicus Y.N.15.51 chromosome, complete genometransposase IS116/IS110/IS902 family protein4e-0857.8
NC_003106:1175000:117556011755601176207648Sulfolobus tokodaii str. 7, complete genomehypothetical protein9e-0856.6
NC_008060:2913671:2927028292702829282901263Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetransposase IS116/IS110/IS9027e-0856.6
NC_002754:1749834:176935317693531770303951Sulfolobus solfataricus P2, complete genomeTransposase ISC11909e-0856.2
NC_007434:1322500:1349622134962213509381317Burkholderia pseudomallei 1710b chromosome I, complete sequenceTransposase1e-0755.8
NC_014158:233733:2820262820262832401215Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-0755.5
NC_003106:1899691:191067019106701911620951Sulfolobus tokodaii str. 7, complete genomehypothetical insertion element DNA-binding protein3e-0754.7
NC_014831:1140356:114340811434081143905498Thermaerobacter marianensis DSM 12885 chromosome, complete genome4e-0754.3
NC_015186:347346:356229356229356771543Acidiphilium multivorum AIU301, complete genomeputative transposase5e-0753.9
NC_009484:318500:326433326433326975543Acidiphilium cryptum JF-5 chromosome, complete genometransposase IS116/IS110/IS902 family protein5e-0753.9
NC_002754:1329000:134199713419971342947951Sulfolobus solfataricus P2, complete genomeTransposon ISC11906e-0753.5
NC_007951:1928906:194963619496361950214579Burkholderia xenovorans LB400 chromosome 1, complete sequence8e-0753.1
NC_007952:3196085:3195026319502631962311206Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative transposase1e-0652.8
NC_010660:86445:9314693146943421197Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencetransposase1e-0652.8
NC_013730:4502965:4517665451766545186691005Spirosoma linguale DSM 74, complete genometransposase IS116/IS110/IS902 family protein1e-0652.8
NC_012632:1710223:1717990171799017191081119Sulfolobus islandicus M.16.27 chromosome, complete genome1e-0652.4
NC_020156:3670500:368519236851923685623432Nonlabens dokdonensis DSW-6, complete genomeIS110 family transposase2e-0652
NC_002754:1782460:178572617857261786205480Sulfolobus solfataricus P2, complete genomeSecond ORF in transposon ISC11902e-0651.6
NC_009488:903000:904060904060905022963Orientia tsutsugamushi str. Boryong, complete genometransposase and inactivated derivative2e-0651.6
NC_008258:1934479:1935527193552719367231197Shigella flexneri 5 str. 8401, complete genomeISSfl2 ORF2e-0651.6
NC_015589:3241364:326757132675713268419849Desulfotomaculum ruminis DSM 2154 chromosome, complete genome3e-0651.2
NC_012622:2319598:232901023290102329954945Sulfolobus islandicus Y.G.57.14 chromosome, complete genometransposase IS116/IS110/IS902 family protein3e-0651.2
NC_008253:3941938:3987475398747539886711197Escherichia coli 536, complete genomeputative transposase3e-0651.2
NC_007607:87000:1224321224321236281197Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceISSfl2 ORF3e-0651.2
NC_010658:1772994:1785651178565117868471197Shigella boydii CDC 3083-94, complete genometransposase4e-0650.8
NC_009488:1165927:117195611719561172918963Orientia tsutsugamushi str. Boryong, complete genometransposase and inactivated derivative5e-0650.8
NC_007384:1763375:177004517700451770461417Shigella sonnei Ss046, complete genomeISSfl2 ORF6e-0650.4
NC_009488:1126000:114224111422411143203963Orientia tsutsugamushi str. Boryong, complete genometransposase and inactivated derivative8e-0649.7