Pre_GI: BLASTP Hits

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Query: NC_016582:1707756:1710431 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 1710431, End: 1710904, Length: 474

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015690:6595395:660618266061826606637456Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-30131
NC_000964:732255:753817753817754260444Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-1995.5
NC_017195:709098:731988731988732431444Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYesE2e-1994.7
NC_020244:747762:771758771758772204447Bacillus subtilis XF-1, complete genomehypothetical protein2e-1994.4
NC_015957:7301546:730108573010857301549465Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein7e-1373.2
NC_003888:8594500:859754085975408597980441Streptomyces coelicolor A3(2), complete genomehypothetical protein8e-1166.2
NC_010501:3448389:346413934641393464516378Pseudomonas putida W619, complete genomeprotein of unknown function DUF14861e-0962