Pre_GI: BLASTP Hits

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Query: NC_016582:11535695:11549840 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 11549840, End: 11550640, Length: 801

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010612:3969244:3969244396924439710281785Mycobacterium marinum M, complete genomeshort-chain dehydrogenase EphD3e-1479
NC_006461:605249:625898625898626692795Thermus thermophilus HB8, complete genomeoxidoreductase, short-chain dehydrogenase/reductase family9e-1373.9
NC_017272:607900:629279629279630073795Thermus thermophilus SG0.5JP17-16 chromosome, complete genomeestradiol 17-beta-dehydrogenase2e-1272.8
NC_013526:955848:955848955848956609762Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeshort-chain dehydrogenase/reductase SDR4e-1168.9
NC_019673:8161242:8177121817712181787461626Saccharothrix espanaensis DSM 44229 complete genomeShort-chain dehydrogenase/reductase5e-1168.6
NC_015391:2449927:246838624683862469207822Carnobacterium sp. 17-4 chromosome, complete genomegluconate 5-dehydrogenase2e-1066.6
NC_017171:1331794:134966313496631350496834Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeputative short-chain dehydrogenase2e-1066.6
NC_007511:1681764:168269916826991683523825Burkholderia sp. 383 chromosome 2, complete sequenceShort-chain dehydrogenase/reductase SDR2e-1066.6
NC_018000:1914945:191712819171281917835708Sinorhizobium fredii USDA 257 chromosome, complete genomebacilysin biosynthesis oxidoreductase BacC2e-1066.2
NC_010172:1079127:110505711050571106049993Methylobacterium extorquens PA1, complete genomeshort-chain dehydrogenase/reductase SDR3e-1065.9
NC_012808:1220378:124734512473451248337993Methylobacterium extorquens AM1, complete genomeputative short-chain dehydrogenase/reductase SDR4e-1065.5
NC_006322:1994000:200706820070682007850783Bacillus licheniformis ATCC 14580, complete genomeacetoin reductase4e-1065.5
NC_004193:3434015:344823334482333448967735Oceanobacillus iheyensis HTE831, complete genomeoxidoreductase5e-1065.1
NC_003063:304962:332827332827333588762Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein6e-1064.7
NC_010725:1419272:144577314457731446771999Methylobacterium populi BJ001, complete genomeshort-chain dehydrogenase/reductase SDR8e-1064.3
NC_016948:3724390:374439837443983745327930Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein8e-1064.3
NC_015580:293803:337025337025337873849Novosphingobium sp. PP1Y, complete genomehypothetical protein9e-1064.3
NC_015703:4933430:498102349810234981778756Runella slithyformis DSM 19594 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) reductase9e-1064.3
NC_011757:748223:774107774107775099993Methylobacterium chloromethanicum CM4, complete genomeshort-chain dehydrogenase/reductase SDR9e-1064.3
NC_014310:2017927:204150220415022042206705Ralstonia solanacearum PSI07 megaplasmid, complete sequenceshort-chain dehydrogenase/reductase1e-0963.5
NC_008312:5278500:527853152785315279334804Trichodesmium erythraeum IMS101, complete genomeshort-chain dehydrogenase/reductase SDR1e-0963.5
NC_018644:516157:522359522359523129771Alpha proteobacterium HIMB59 chromosome, complete genomeshort chain dehydrogenase1e-0963.5
NC_009921:3854969:388984238898423890648807Frankia sp. EAN1pec, complete genomeshort-chain dehydrogenase/reductase SDR3e-0962.4
NC_017272:921193:923347923347924147801Thermus thermophilus SG0.5JP17-16 chromosome, complete genomeestradiol 17-beta-dehydrogenase6e-0961.6
NC_013510:1786194:180240718024071803234828Thermomonospora curvata DSM 43183, complete genomeshort-chain dehydrogenase/reductase SDR6e-0961.6
NC_015497:4564339:458455145845514585396846Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-0860.8
NC_010617:92000:104698104698105474777Kocuria rhizophila DC2201, complete genomeputative oxidoreductase1e-0860.5
NC_009664:570768:572214572214573011798Kineococcus radiotolerans SRS30216, complete genomeshort-chain dehydrogenase/reductase SDR1e-0860.1
NC_016604:2944555:295883729588372959580744Mycobacterium rhodesiae NBB3 chromosome, complete genomedehydrogenase2e-0860.1
NC_014532:1713987:173311517331151733891777Halomonas elongata DSM 2581, complete genomesorbitol dehydrogenase2e-0859.7
NC_017030:2263268:227067422706742271441768Corallococcus coralloides DSM 2259 chromosome, complete genomeshort-chain dehydrogenase/reductase2e-0859.7
NC_015948:2367000:238125323812532382026774Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeoxidoreductase3e-0859.3
NC_009442:1158268:117082011708201171635816Streptococcus suis 05ZYH33 chromosome, complete genomegluconate 5-dehydrogenase3e-0858.9
NC_014643:195948:196439196439197221783Rothia dentocariosa ATCC 17931 chromosome, complete genomeoxidoreductase UcpA5e-0858.5
NC_016935:1636278:171540417154041716123720Paenibacillus mucilaginosus 3016 chromosome, complete genomeglucose 1-dehydrogenase5e-0858.5
NC_008260:187269:200959200959201825867Alcanivorax borkumensis SK2, complete genomeshort chain dehydrogenase, putative6e-0858.2
NC_013446:2164974:218063421806342181413780Comamonas testosteroni CNB-2, complete genomeprobable short-chain dehydrogenase/reductase6e-0858.2
NC_012587:3177583:319336131933613194344984Rhizobium sp. NGR234, complete genomeputative short-chain dehydrogenase/reductase6e-0858.2
NC_017171:1331794:135499213549921355822831Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeputative short-chain dehydrogenase6e-0858.2
NC_008095:8772893:8777638877763887786421005Myxococcus xanthus DK 1622, complete genomeoxidoreductase, short chain dehydrogenase/reductase family6e-0858.2
NC_009480:99640:119736119736120527792Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative short-chain dehydrogenase/reductase5e-0858.2
NC_015856:764651:781410781410782249840Collimonas fungivorans Ter331 chromosome, complete genomeshort-chain alcohol dehydrogenases-like protein5e-0858.2
NC_010397:2063561:207032520703252071179855Mycobacterium abscessus chromosome Chromosome, complete sequenceProbable short-chain dehydrogenase/reductase5e-0858.2
NC_010001:615427:621481621481622278798Clostridium phytofermentans ISDg, complete genomeshort-chain dehydrogenase/reductase SDR8e-0857.8
NC_019744:20500:296832968330459777Cylindrospermum stagnale PCC 7417 plasmid pCYLST.02, completedehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein8e-0857.8
NC_012526:520947:5320755320755330821008Deinococcus deserti VCD115, complete genomeputative Short-chain dehydrogenase1e-0757.4
NC_010612:3813481:382788838278883828754867Mycobacterium marinum M, complete genomeshort-chain membrane-associated dehydrogenase9e-0857.4
NC_016604:5228500:524822052482205249074855Mycobacterium rhodesiae NBB3 chromosome, complete genomeshort-chain dehydrogenase1e-0757
NC_009720:464078:469875469875470651777Xanthobacter autotrophicus Py2, complete genomeshort-chain dehydrogenase/reductase SDR1e-0757
NC_015312:1220500:124054612405461241409864Pseudonocardia dioxanivorans CB1190 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) reductase1e-0757
NC_015873:380485:403000403000403803804Megasphaera elsdenii DSM 20460, complete genomegluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase)2e-0756.6
NC_009664:4423829:448606844860684486898831Kineococcus radiotolerans SRS30216, complete genomeshort-chain dehydrogenase/reductase SDR2e-0756.6
NC_014960:1697818:173127317312731732160888Anaerolinea thermophila UNI-1, complete genomeputative oxidoreductase2e-0756.6
NC_015856:3832000:3838190383819038392361047Collimonas fungivorans Ter331 chromosome, complete genomeShort chain dehydrogenase2e-0756.6
NC_015564:1199330:120568712056871206523837Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeputative short-chain dehydrogenase/reductase3e-0755.8
NC_017986:5605197:563211656321165633033918Pseudomonas putida ND6 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR3e-0755.8
NC_009952:526456:539847539847540614768Dinoroseobacter shibae DFL 12, complete genomeshort-chain dehydrogenase/reductase SDR4e-0755.5
NC_016943:4194002:424584042458404246661822Blastococcus saxobsidens DD2, complete genome3-oxoacyl-ACP reductase4e-0755.5
NC_008699:3775561:377686037768603777690831Nocardioides sp. JS614, complete genomeshort-chain dehydrogenase/reductase SDR4e-0755.5
NC_009481:873921:888309888309889130822Synechococcus sp. WH 7803 chromosome, complete genomeshort-chain dehydrogenase/reductase family protein4e-0755.5
NC_004193:2692136:269885726988572699633777Oceanobacillus iheyensis HTE831, complete genomeshort chain dehydrogenase5e-0755.1
NC_016776:66223:726687266873459792Bacteroides fragilis 638R, complete genomeputative gluconate 5-dehydrogenase5e-0755.1
NC_015957:7348269:736295073629507363657708Streptomyces violaceusniger Tu 4113 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR5e-0755.1
NC_003228:76140:825858258583376792Bacteroides fragilis NCTC 9343, complete genomegluconate 5-dehydrogenase5e-0755.1
NC_006347:70607:770537705377844792Bacteroides fragilis YCH46, complete genomegluconate 5-dehydrogenase5e-0755.1
NC_016111:134444:146520146520147362843Streptomyces cattleya NRRL 8057, complete genomecarveol dehydrogenase4e-0755.1
NC_018691:2214464:223139422313942232188795Alcanivorax dieselolei B5 chromosome, complete genomeShort chain dehydrogenase, putative7e-0754.7
NC_007511:3103999:312221131222113122990780Burkholderia sp. 383 chromosome 2, complete sequenceShort-chain dehydrogenase/reductase SDR7e-0754.7
NC_012032:448161:469384469384470172789Chloroflexus sp. Y-400-fl, complete genomeshort-chain dehydrogenase/reductase SDR6e-0754.7
NC_010175:448020:469242469242470030789Chloroflexus aurantiacus J-10-fl, complete genomeshort-chain dehydrogenase/reductase SDR6e-0754.7
NC_017904:2379387:243292324329232433789867Mycobacterium sp. MOTT36Y chromosome, complete genomeshort-chain membrane-associated dehydrogenase6e-0754.7
NC_013510:4484000:450168245016824502560879Thermomonospora curvata DSM 43183, complete genomeshort-chain dehydrogenase/reductase SDR9e-0754.3
NC_009614:1461628:147342214734221474225804Bacteroides vulgatus ATCC 8482 chromosome, complete genomegluconate 5-dehydrogenase9e-0754.3
NC_020126:6190662:619233361923336193082750Myxococcus stipitatus DSM 14675, complete genome3-oxoacyl-ACP reductase9e-0754.3
NC_018524:444217:471903471903472667765Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeshort chain dehydrogenase family protein9e-0754.3
NC_014479:509919:520601520601521344744Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeshort-chain dehydrogenase/reductase SDR1e-0653.9
NC_014539:743523:761306761306762046741Burkholderia sp. CCGE1003 chromosome 1, complete sequenceshort-chain dehydrogenase/reductase SDR1e-0653.9
NC_015458:1692401:171089717108971711649753Pusillimonas sp. T7-7 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-0653.9
NC_017167:2203159:220768022076802208405726Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1short-chain dehydrogenase/reductase SDR2e-0653.5
NC_014391:3596812:359879635987963599524729Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-0653.5
NC_014815:5603000:562254956225495623277729Micromonospora sp. L5 chromosome, complete genomeshort-chain dehydrogenase/reductase sdr2e-0653.5
NC_014924:1701952:171540317154031716170768Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-0653.5
NC_015167:313506:319575319575320339765Cellulophaga lytica DSM 7489 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) reductase1e-0653.5
NC_018691:2254566:225726422572642258103840Alcanivorax dieselolei B5 chromosome, complete genomeOxidoreductase, short chain dehydrogenase/reductase family2e-0653.1
NC_013757:368973:370186370186371055870Geodermatophilus obscurus DSM 43160, complete genomeshort-chain dehydrogenase/reductase SDR2e-0653.1
NC_011146:2485625:249945224994522500213762Geobacter bemidjiensis Bem, complete genomeshort-chain dehydrogenase/reductase SDR2e-0653.1
NC_003228:2473956:249362124936212494373753Bacteroides fragilis NCTC 9343, complete genomeputative 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase2e-0653.1
NC_016947:2380500:241186724118672412598732Mycobacterium intracellulare MOTT-02 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-0652.8
NC_008268:3233961:325876532587653259592828Rhodococcus sp. RHA1, complete genomedehydrogenase2e-0652.8
NC_014307:1855356:187881418788141879560747Ralstonia solanacearum CFBP2957 chromosome, complete genomeshort-chain dehydrogenase/reductase sdr3e-0652.4
NC_017047:2957957:298332529833252984074750Rahnella aquatilis HX2 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR3e-0652.4
NC_015061:2927707:295307529530752953824750Rahnella sp. Y9602 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR3e-0652.4
NC_012028:514000:514024514024514803780Halorubrum lacusprofundi ATCC 49239 chromosome 2, complete genomeshort-chain dehydrogenase/reductase SDR3e-0652.4
NC_014305:66500:780357803578808774Erwinia billingiae Eb661 plasmid pEB170, complete sequenceAcetoin reductase4e-0652
NC_017955:343931:357197357197357922726Modestobacter marinus, complete genomeshort-chain dehydrogenase4e-0652
NC_009485:7021228:704780470478047048643840Bradyrhizobium sp. BTAi1 chromosome, complete genomeshort-chain dehydrogenase4e-0652
NC_009664:4423829:450777245077724508545774Kineococcus radiotolerans SRS30216, complete genomeshort-chain dehydrogenase/reductase SDR4e-0652
NC_014221:1786122:180839718083971809179783Truepera radiovictrix DSM 17093 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR5e-0651.6
NC_007760:3655433:367120636712063671967762Anaeromyxobacter dehalogenans 2CP-C, complete genomeshort-chain dehydrogenase/reductase SDR6e-0651.6
NC_011071:1178423:119178311917831192511729Stenotrophomonas maltophilia R551-3, complete genomeshort-chain dehydrogenase/reductase SDR7e-0651.2
NC_010676:2720068:272764527276452728400756Burkholderia phytofirmans PsJN chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR7e-0651.2
NC_016047:637778:646438646438647184747Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeoxidoreductase7e-0651.2
NC_017195:2498113:250530725053072506053747Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeoxidoreductase7e-0651.2
NC_011894:3161289:316877831687783169533756Methylobacterium nodulans ORS 2060, complete genomeshort-chain dehydrogenase/reductase SDR6e-0651.2
NC_010552:2454776:246240424624042463156753Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR8e-0650.8