Pre_GI: BLASTP Hits

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Query: NC_016582:10287865:10304074 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10304074, End: 10304766, Length: 693

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014650:475662:502669502669503652984Geobacillus sp. Y4.1MC1 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase2e-53209
NC_008146:2744612:276963327696332770502870Mycobacterium sp. MCS, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD8e-53206
NC_008705:2763131:278752127875212788390870Mycobacterium sp. KMS, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase8e-53206
NC_003911:3864852:389731638973163898296981Silicibacter pomeroyi DSS-3, complete genomeextradiol ring-cleavage dioxygenase family protein8e-43173
NC_010645:1341475:1361237136123713622411005Bordetella avium 197N, complete genomecatechol 2,3-dioxygenase (metapyrocatechase)2e-39162
NC_016885:1153277:117191011719101172824915Pyrobaculum oguniense TE7 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase1e-25116
NC_011961:891815:914189914189915154966Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence3,4-dihydroxyphenylacetate 2,3-dioxygenase1e-24113
NC_012588:620353:638651638651639598948Sulfolobus islandicus M.14.25 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-21102
NC_012726:641763:660381660381661328948Sulfolobus islandicus M.16.4 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-21102
NC_012632:638347:656645656645657592948Sulfolobus islandicus M.16.27 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase6e-21100
NC_017275:594951:613328613328614275948Sulfolobus islandicus HVE10/4 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase7e-21100
NC_017276:675229:676701676701677648948Sulfolobus islandicus REY15A chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase8e-21100
NC_012623:1631985:164739216473921648339948Sulfolobus islandicus Y.N.15.51 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase9e-2097.1
NC_012622:940990:942462942462943409948Sulfolobus islandicus Y.G.57.14 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase9e-2097.1
NC_012589:842270:843742843742844689948Sulfolobus islandicus L.S.2.15, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase9e-2097.1
NC_013730:4811911:483133248313324832291960Spirosoma linguale DSM 74, complete genomeCatechol 2,3-dioxygenase2e-1582.8
NC_014974:1076565:1082784108278410837881005Thermus scotoductus SA-01 chromosome, complete genomecatechol 2,3 dioxygenase2e-1479
NC_014206:2971304:298556329855632986534972Geobacillus sp. C56-T3 chromosome, complete genomecatechol 2,3 dioxygenase1e-1273.6
NC_007973:1411714:143766914376691438613945Ralstonia metallidurans CH34 chromosome 1, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase2e-1272.4
NC_014974:1076565:109546210954621096436975Thermus scotoductus SA-01 chromosome, complete genomecatechol 2,3 dioxygenase4e-1271.6
NC_014831:2133060:2143087214308721440941008Thermaerobacter marianensis DSM 12885 chromosome, complete genomecatechol 2,3 dioxygenase1e-1170.1
NC_016147:730810:742222742222743166945Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecatechol 2,3 dioxygenase2e-1065.9
NC_012522:5847699:5859095585909558601801086Rhodococcus opacus B4, complete genomeputative catechol 2,3-dioxygenase4e-1065.1
NC_021171:2019755:203625020362502037164915Bacillus sp. 1NLA3E, complete genomecatechol 2,3 dioxygenase4e-1065.1
NC_016147:1788219:180071218007121801656945Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecatechol 2,3-dioxygenase4e-1064.7
NC_011666:1572487:159318215931821594102921Methylocella silvestris BL2, complete genomecatechol 2,3 dioxygenase3e-0962.4
NC_012589:347020:3524223524223534291008Sulfolobus islandicus L.S.2.15, complete genomecatechol 2,3 dioxygenase5e-0961.6
NC_017275:377800:3825393825393835461008Sulfolobus islandicus HVE10/4 chromosome, complete genomecatechol 2,3 dioxygenase4e-0961.6
NC_013769:316789:3407663407663417731008Sulfolobus islandicus L.D.8.5 chromosome, complete genomecatechol 2,3-dioxygenase4e-0961.6
NC_012726:346539:3519503519503529571008Sulfolobus islandicus M.16.4 chromosome, complete genomecatechol 2,3 dioxygenase4e-0961.6
NC_017276:337286:3428503428503438571008Sulfolobus islandicus REY15A chromosome, complete genomecatechol 2,3 dioxygenase5e-0961.2
NC_002754:1061851:1062806106280610638131008Sulfolobus solfataricus P2, complete genomeCatechol 2,3-dioxygenase (metapyrocatechase)6e-0960.8
NC_017506:1100679:113707611370761137948873Marinobacter adhaerens HP15 chromosome, complete genomecatechol 2,3-dioxygenase1e-0860.1
NC_008148:2231045:2253126225312622541601035Rubrobacter xylanophilus DSM 9941, complete genomeCatechol 2,3-dioxygenase2e-0859.7
NC_008702:2039462:204118420411842042116933Azoarcus sp. BH72, complete genomeprobable Catechol 2,3-dioxygenase3e-0858.9