Pre_GI: BLASTP Hits

Some Help

Query: NC_016582:10227196:10260814 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10260814, End: 10261893, Length: 1080

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015957:6859259:6867186686718668682681083Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit6e-152536
NC_016582:1707756:171886917188691719864996Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region9e-135479
NC_015957:7408466:7445734744573474468641131Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit1e-129462
NC_016582:1751988:176704117670411767985945Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-114412
NC_016582:1639375:166690516669051667873969Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region5e-106384
NC_016582:11878078:118879981188799811888642645Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region4e-103375
NC_009921:465683:4808934808934819991107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-91336
NC_016582:11878078:118930241189302411893827804Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-91336
NC_009921:522000:5221705221705232761107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region5e-90331
NC_009921:3854969:3864152386415238652221071Frankia sp. EAN1pec, complete genomeIntegrase catalytic region7e-90330
NC_009921:4035225:4044349404434940454551107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region1e-88326
NC_015957:7348269:738583073858307386612783Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-87323
NC_009921:1668306:1700587170058717016931107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-86319
NC_009921:3551036:3572412357241235735181107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region9e-86317
NC_009921:5202607:5221516522151652227031188Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-83309
NC_016582:10326938:1033994510339945103410241080Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region6e-82304
NC_015957:7301546:7302863730286373038971035Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit6e-80298
NC_009921:3551036:3568885356888535699521068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-74278
NC_009921:8147947:8154281815428181553481068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region8e-74277
NC_009921:522000:5538505538505549171068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-72273
NC_009921:522000:5591945591945602611068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-72272
NC_015957:7348269:7384650738465073857621113Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit5e-69261
NC_016582:1707756:1726558172655817276251068Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region8e-69261
NC_016582:11920331:1193134011931340119324521113Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-67256
NC_019673:2051363:211413521141352115091957Saccharothrix espanaensis DSM 44229 complete genomeIntegrase, catalytic subunit2e-66253
NC_013131:621366:6389796389796400521074Catenulispora acidiphila DSM 44928, complete genomeIntegrase catalytic region3e-65249
NC_016582:10326938:1032823310328233103292881056Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-64246
NC_016582:11878078:1188672811886728118878011074Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-63243
NC_016582:1639375:1670249167024916713461098Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein7e-63241
NC_019673:2051363:2115166211516621161851020Saccharothrix espanaensis DSM 44229 complete genomeIntegrase, catalytic subunit2e-62239
NC_009921:4035225:403953840395384040437900Frankia sp. EAN1pec, complete genomeIntegrase catalytic region4e-62238
NC_016582:11535695:115444651154446511544953489Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-60232
NC_015957:7301546:730644173064417307397957Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit3e-59229
NC_016582:10326938:103388221033882210339559738Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region6e-59228
NC_015957:7301546:7310381731038173114781098Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit9e-59227
NC_015957:7408466:7435711743571174368021092Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit1e-58227
NC_009921:8549757:8553073855307385540741002Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-58225
NC_016582:10326938:1035565010355650103567411092Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit5e-58225
NC_016582:10326938:103466781034667810347607930Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-57223
NC_009380:4702815:471160147116014712491891Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein2e-53209
NC_015957:7249873:727039172703917271188798Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-52206
NC_016582:10227196:102306371023063710231404768Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit4e-51202
NC_016582:1751988:177133117713311772044714Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein7e-48191
NC_015957:7533000:754114375411437541877735Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-45183
NC_019673:3041936:304944930494493050132684Saccharothrix espanaensis DSM 44229 complete genomeIntegrase2e-43176
NC_009921:565947:5692265692265703051080Frankia sp. EAN1pec, complete genomeIntegrase catalytic region6e-42171
NC_015957:7249873:727166572716657272381717Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit6e-41168
NC_009921:8147947:816043281604328161139708Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-40166
NC_009921:5275694:530289853028985303542645Frankia sp. EAN1pec, complete genomehypothetical protein5e-40165
NC_009921:4035225:406088440608844061453570Frankia sp. EAN1pec, complete genomeconserved hypothetical protein2e-38159
NC_015957:7348269:736766073676607368379720Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit1e-37157
NC_009921:565947:576808576808577452645Frankia sp. EAN1pec, complete genomehypothetical protein1e-36153
NC_016582:10159486:102029131020291310203428516Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-35150
NC_016582:11734963:117419241174192411742577654Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit2e-34147
NC_008576:3307297:3324318332431833253851068Magnetococcus sp. MC-1, complete genomehypothetical protein2e-34146
NC_016582:11920331:119284311192843111929069639Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-33142
NC_016582:11734963:1174686611746866117479061041Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transposase3e-33142
NC_009921:5331565:533156553315655332086522Frankia sp. EAN1pec, complete genomeIntegrase catalytic region9e-33141
NC_014318:6395392:646027764602776460825549Amycolatopsis mediterranei U32 chromosome, complete genomeputative integrase4e-32139
NC_017186:6395435:646032164603216460869549Amycolatopsis mediterranei S699 chromosome, complete genomeintegrase4e-32139
NC_016582:10227196:102563301025633010256902573Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region8e-31134
NC_019673:6362458:637392763739276374445519Saccharothrix espanaensis DSM 44229 complete genomeIntegrase1e-29130
NC_016582:10159486:101839421018394210184514573Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-29129
NC_012108:4971086:498056549805654981104540Desulfobacterium autotrophicum HRM2, complete genometransposase (IS3 family protein)1e-26120
NC_015957:7348269:737365873736587373957300Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-26120
NC_009253:3272000:3283650328365032847441095Desulfotomaculum reducens MI-1 chromosome, complete genomeintegrase catalytic subunit2e-26120
NC_008510:3189349:3198358319835831993891032Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, unnamed15e-26119
NC_016582:1639375:166112416611241661675552Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein8e-25114
NC_016582:11920331:119351971193519711935664468Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-23110
NC_008095:2117952:212093821209382121837900Myxococcus xanthus DK 1622, complete genomeputative transposase1e-23110
NC_017186:6395435:646095064609506461387438Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein8e-23108
NC_014318:6395392:646090664609066461343438Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein8e-23108
NC_016582:1751988:176099517609951761345351Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-22106
NC_021184:4524500:452522845252284526019792Desulfotomaculum gibsoniae DSM 7213, complete genome3e-22106
NC_009921:565947:576413576413576805393Frankia sp. EAN1pec, complete genomeputative transposase5e-22105
NC_016582:1751988:175637017563701757041672Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-21103
NC_012108:4971086:500053150005315001496966Desulfobacterium autotrophicum HRM2, complete genomeTranposase3e-21102
NC_016582:1639375:166057716605771661089513Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase1e-20100
NC_004342:3668371:367378736737873674737951Leptospira interrogans serovar Lai str. 56601 chromosome I,transposase1e-1997.4
NC_008510:3189349:320197132019713202969999Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, IS1477-like2e-1997.1
NC_016582:10326938:103295081032950810329771264Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region4e-1995.9
NC_015957:7533000:753935975393597539760402Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-1995.9
NC_016582:1639375:166180316618031662237435Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region4e-1892.8
NC_009921:5508000:5511758551175855127861029Frankia sp. EAN1pec, complete genomehypothetical protein5e-1892.4
NC_016582:10104458:101103541011035410110614261Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-1790.9
NC_009921:5331565:533223653322365332628393Frankia sp. EAN1pec, complete genomehypothetical protein3e-1789.4
NC_008576:3307297:332271433227143323175462Magnetococcus sp. MC-1, complete genometransposase, IS34e-1789.4
NC_012108:4937000:4950508495050849516171110Desulfobacterium autotrophicum HRM2, complete genometransposase4e-1789.4
NC_013131:7401253:741431574143157414974660Catenulispora acidiphila DSM 44928, complete genome8e-1788.2
NC_013440:1131376:113753611375361138090555Haliangium ochraceum DSM 14365, complete genome3e-1686.3
NC_016582:11535695:115450311154503111545480450Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase3e-1582.8
NC_009921:5202607:524333152433315243849519Frankia sp. EAN1pec, complete genomehypothetical protein4e-1582.8
NC_009921:5331565:533712553371255337526402Frankia sp. EAN1pec, complete genomehypothetical protein1e-1480.9
NC_008536:9538891:9557261955726195583801120Solibacter usitatus Ellin6076, complete genome3e-1479.7
NC_016582:2009588:201909020190902019503414Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-1377.8
NC_009921:3666898:370015637001563700518363Frankia sp. EAN1pec, complete genomehypothetical protein1e-1377.4
NC_019673:6362458:637447063744706374811342Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-1375.5
NC_016582:1707756:172005317200531720457405Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase6e-1375.5
NC_016582:10326938:103342551033425510334638384Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transposase1e-1274.3
NC_009142:5698100:571334257133425713839498Saccharopolyspora erythraea NRRL 2338, complete genomeintegrase1e-1274.3
NC_008576:3307297:332223533222353322705471Magnetococcus sp. MC-1, complete genomehypothetical protein2e-1273.9
NC_019673:2257259:226723422672342267608375Saccharothrix espanaensis DSM 44229 complete genomeputative secreted protein3e-1272.8
NC_009921:3666898:367405936740593674655597Frankia sp. EAN1pec, complete genomehypothetical protein6e-1272
NC_013440:1480855:149309714930971493552456Haliangium ochraceum DSM 14365, complete genome1e-1170.9
NC_016582:1639375:165253416525341652938405Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase2e-1170.5
NC_008576:1413778:141559914155991416114516Magnetococcus sp. MC-1, complete genomehypothetical protein2e-1170.1
NC_013440:1349402:135811713581171358620504Haliangium ochraceum DSM 14365, complete genome3e-1169.7
NC_016582:10104458:101106331011063310110989357Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase2e-1067.4
NC_016582:11878078:118943211189432111894485165Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-0964.3
NC_016582:10326938:103293431032934310329486144Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0963.5
NC_016582:11878078:118939981189399811894132135Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein6e-0962.4
NC_009921:565947:580591580591580881291Frankia sp. EAN1pec, complete genomeputative transposase7e-0962
NC_013440:1436784:147452814745281474956429Haliangium ochraceum DSM 14365, complete genome8e-0961.6
NC_015957:7348269:738439173843917384720330Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein9e-0961.6
NC_016582:1639375:167238616723861672601216Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-0861.2
NC_015957:7408466:743524374352437435677435Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-0757.4
NC_013440:1580802:159211115921111592464354Haliangium ochraceum DSM 14365, complete genome2e-0757.4
NC_013173:1259898:126863512686351269489855Desulfomicrobium baculatum DSM 4028, complete genomeIntegrase catalytic region2e-0757
NC_013173:1671288:168240316824031683257855Desulfomicrobium baculatum DSM 4028, complete genomeIntegrase catalytic region2e-0757
NC_013173:3679326:372421037242103725067858Desulfomicrobium baculatum DSM 4028, complete genomeIntegrase catalytic region3e-0756.6
NC_011770:4924127:494838449483844949226843Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-0756.6
NC_011883:1478173:148560914856091486397789Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Integrase catalytic region3e-0756.2
NC_009921:4757148:478037547803754781085711Frankia sp. EAN1pec, complete genomehypothetical protein3e-0756.2
NC_011883:303980:317570317570318358789Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Integrase catalytic region5e-0755.8
NC_011883:519308:523987523987524775789Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Integrase catalytic region5e-0755.8
NC_011883:2826000:283523728352372836025789Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Integrase catalytic region5e-0755.8
NC_011770:2499432:250548525054852506327843Pseudomonas aeruginosa LESB58, complete genomeinsertion sequence IS407 OrfB9e-0754.7
NC_011770:2499432:254421925442192545061843Pseudomonas aeruginosa LESB58, complete genomeinsertion sequence IS407 OrfB9e-0754.7
NC_002516:1031386:106848910684891069331843Pseudomonas aeruginosa PAO1, complete genomehypothetical protein3e-0653.1
NC_010995:671389:675057675057675899843Cellvibrio japonicus Ueda107, complete genometransposase3e-0653.1
NC_010995:948041:972668972668973510843Cellvibrio japonicus Ueda107, complete genometransposase3e-0653.1
NC_003063:304962:324264324264325193930Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein4e-0652.8
NC_003305:1743939:174956517495651750494930Agrobacterium tumefaciens str. C58 chromosome linear, completeIS3 family transposase4e-0652.8
NC_012988:1459961:145996114599611460818858Methylobacterium extorquens DM4, complete genome7e-0652
NC_013440:971717:983650983650984006357Haliangium ochraceum DSM 14365, complete genome7e-0652