Pre_GI: BLASTP Hits

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Query: NC_016582:10227196:10232911 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10232911, End: 10235655, Length: 2745

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:4714478:4747302474730247500732772Pectobacterium wasabiae WPP163, complete genomehypothetical protein0668
NC_015690:5263108:5275026527502652776052580Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-162573
NC_016935:5017317:5029233502923350318122580Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein1e-161570
NC_020244:783125:7941227941227966952574Bacillus subtilis XF-1, complete genomehypothetical protein2e-144513
NC_000964:764118:7761717761717787442574Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-142507
UCMB5137:303641:3166173166173191902574Bacillus atrophaeus UCMB-5137putative enzyme2e-142507
NC_017195:742298:7543527543527569252574Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completehypothetical protein4e-142506
NC_019896:3281193:3284735328473532873082574Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein2e-142506
NC_016047:876875:8898348898348924072574Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein5e-142505
NC_014976:2981777:2994730299473029973032574Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein2e-141503
NC_014479:736102:7471067471067496792574Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein2e-140500
NC_014639:227118:2381192381192406922574Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein1e-139497
CP002207:227118:2381192381192406922574Bacillus atrophaeus 1942, complete genomeputative enzyme1e-139497
NC_008609:2643000:2665159266515926677232565Pelobacter propionicus DSM 2379, complete genomehypothetical protein9e-1066.2