Pre_GI: BLASTP Hits

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Query: NC_016582:10227196:10231414 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10231414, End: 10231734, Length: 321

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016582:11920331:119284311192843111929069639Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-32137
NC_016582:1639375:1670249167024916713461098Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-29127
NC_015957:7249873:727137972713797271663285Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-29126
NC_016582:1639375:165371816537181654050333Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-27121
NC_015957:7301546:7310381731038173114781098Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-27121
NC_016582:1639375:166112416611241661675552Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein9e-27118
NC_016582:1751988:176046717604671760760294Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein7e-26115
NC_016582:11878078:1188672811886728118878011074Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-24110
NC_019673:2051363:2115166211516621161851020Saccharothrix espanaensis DSM 44229 complete genomeIntegrase, catalytic subunit5e-24109
NC_015957:7408466:7435711743571174368021092Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit9e-22102
NC_016582:10104458:101099401010994010110185246Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein5e-2199.8
NC_016582:10326938:1035565010355650103567411092Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit1e-2098.2
NC_009380:4702815:471160147116014712491891Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein2e-1684.3
NC_016582:1751988:177133117713311772044714Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-1374.7
NC_013595:8162181:818995581899558190131177Streptosporangium roseum DSM 43021, complete genomehypothetical protein9e-1372.4
NC_009142:5698100:571334257133425713839498Saccharopolyspora erythraea NRRL 2338, complete genomeintegrase6e-0959.7
NC_016582:11920331:119351971193519711935664468Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-0652
NC_016582:1707756:1726558172655817276251068Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-0651.2
NC_016582:10227196:102318171023181710232128312Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-0650.4
NC_016582:10326938:1033994510339945103410241080Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-0650.4