Pre_GI: BLASTP Hits

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Query: NC_016582:1018014:1019529 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 1019529, End: 1020515, Length: 987

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014815:4621552:4632148463214846331581011Micromonospora sp. L5 chromosome, complete genomelipoprotein, ATP binding protein2e-103375
NC_021177:1418213:142031514203151421298984Streptomyces fulvissimus DSM 40593, complete genomePutative secreted protein1e-76286
NC_010175:3712456:373255137325513733528978Chloroflexus aurantiacus J-10-fl, complete genomehypothetical protein5e-46185
NC_013093:4890557:489833248983324899318987Actinosynnema mirum DSM 43827, complete genomehypothetical protein1e-45183
NC_014217:4550544:458194745819474582924978Starkeya novella DSM 506 chromosome, complete genomehypothetical protein6e-38158
NC_009050:567209:569215569215570159945Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceUncharacterized protein UPF00653e-36152
NC_011958:1031592:106401610640161064960945Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein3e-36152
NC_014632:336000:3373933373933384211029Ilyobacter polytropus DSM 2926 chromosome, complete genomehypothetical protein3e-34145
NC_020302:2219378:222304822230482224034987Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein1e-28127
NC_014831:2082304:2097004209700420980621059Thermaerobacter marianensis DSM 12885 chromosome, complete genomehypothetical protein2e-28126
NC_014632:312000:3279963279963290061011Ilyobacter polytropus DSM 2926 chromosome, complete genomehypothetical protein1e-25117
NC_015387:155728:165118165118166092975Marinithermus hydrothermalis DSM 14884 chromosome, complete genomehypothetical protein1e-24113
NC_016582:2009588:2011803201180320128161014Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein5e-24112
NC_020272:3187482:319103431910343191987954Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein2e-22106
NC_018644:478077:483074483074484054981Alpha proteobacterium HIMB59 chromosome, complete genomeTripartite tricarboxylate transporter family receptor8e-22104
NC_013946:2854219:286904928690492870014966Meiothermus ruber DSM 1279 chromosome, complete genomehypothetical protein7e-21101
NC_009848:775000:789166789166790146981Bacillus pumilus SAFR-032, complete genomeTTT family tricarboxylate membrane protein3e-2099.8
NC_008786:3915000:3920406392040639214581053Verminephrobacter eiseniae EF01-2, complete genomeUncharacterized protein UPF00657e-2098.2
NC_010511:4696868:4723426472342647244331008Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein8e-1994.7
NC_011740:3739395:374012437401243741098975Escherichia fergusonii ATCC 35469, complete genomeputative periplasmic binding protein9e-1994.4
NC_010067:171053:173024173024174001978Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1892.4
NC_015424:2726223:274819727481972749183987Aeromonas veronii B565 chromosome, complete genomeTricarboxylic transporter3e-1892.4
NC_012125:2826624:286980428698042870781978Salmonella enterica subsp. enterica serovar Paratyphi C straintricarboxylic transport9e-1891.3
NC_011083:2847318:290910129091012910078978Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,tricarboxylic transport9e-1891.3
NC_011080:2897977:291123029112302912207978Salmonella enterica subsp. enterica serovar Newport str. SL254,tricarboxylic transport9e-1891.3
NC_010102:2881714:289873228987322899709978Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-1891.3
NC_011205:2962270:297928429792842980261978Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tricarboxylic transport9e-1891.3
NC_011274:2793355:281036928103692811346978Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein9e-1891.3
NC_011294:2802502:281951728195172820494978Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein9e-1891.3
NC_008599:903530:907435907435908412978Campylobacter fetus subsp. fetus 82-40, complete genometricarboxylic transport8e-1891.3
NC_003197:2894344:293459029345902935567978Salmonella typhimurium LT2, complete genometricarboxylic transport1e-1790.5
NC_011149:2829811:284305128430512844028978Salmonella enterica subsp. enterica serovar Agona str. SL483,tricarboxylic transport1e-1790.5
NC_011094:2791719:284171728417172842694978Salmonella enterica subsp. enterica serovar Schwarzengrund strtricarboxylic transport1e-1790.5
NC_016810:2943912:295716629571662958143978Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1790.5
NC_016856:2896630:295482529548252955802978Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stricarboxylic transport1e-1790.5
NC_016857:2943912:295716629571662958143978Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74tricarboxylic transport1e-1790.5
NC_016860:2917910:295815629581562959133978Salmonella enterica subsp. enterica serovar Typhimurium strtricarboxylic transport protein1e-1790.5
NC_016863:2844883:290307829030782904055978Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1tricarboxylic transport1e-1790.5
NC_017046:2943929:295590629559062956883978Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-1790.5
NC_006905:2857699:288927328892732890250978Salmonella enterica subsp. enterica serovar Choleraesuis strtricarboxylic transport2e-1790.1
NC_015563:4206112:420716242071624208142981Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein6e-1788.6
NC_015573:3243613:3254378325437832553911014Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein8e-1684.7
NC_012660:1579204:159736915973691598352984Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transporter-like exported protein5e-1582
NC_008705:868623:950022950022950990969Mycobacterium sp. KMS, complete genomeUncharacterized protein UPF00656e-1581.6
NC_014640:6971000:698571969857196986717999Achromobacter xylosoxidans A8 chromosome, complete genomeextra-cytoplasmic solute receptor family protein 1815e-1479
NC_008314:2744553:275433427543342755311978Ralstonia eutropha H16 chromosome 2, complete sequenceprobable extra-cytoplasmic solute receptor7e-1478.2
NC_008752:620802:6254526254526264531002Acidovorax avenae subsp. citrulli AAC00-1, complete genomeuncharacterized protein UPF00652e-1377
NC_019897:3810000:3864933386493338660091077Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein2e-1377
NC_016633:14000:302863028631257972Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomehypothetical protein3e-1376.3
NC_007963:814148:814148814148815137990Chromohalobacter salexigens DSM 3043, complete genomeUncharacterized protein UPF00653e-1376.3
NC_002927:5327094:5332474533247453334781005Bordetella bronchiseptica RB50, complete genomehypothetical protein5e-1375.5
NC_016832:2743801:276080927608092761618810Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-1374.7
NC_004631:2755306:277351027735102774319810Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-1374.7
NC_003198:2769449:278765327876532788462810Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-1374.7
NC_007963:3553678:3563447356344735644511005Chromohalobacter salexigens DSM 3043, complete genomeUncharacterized protein UPF00652e-1273.9
NC_010002:1584500:160658916065891607581993Delftia acidovorans SPH-1, complete genomehypothetical protein2e-1273.6
NC_008782:4229306:424801542480154248983969Acidovorax sp. JS42, complete genomeUncharacterized protein UPF00653e-1272.8
NC_015677:3787419:378741937874193788393975Ramlibacter tataouinensis TTB310 chromosome, complete genomeextracytoplasmic binding receptor4e-1272.4
NC_010002:4175809:4186540418654041875891050Delftia acidovorans SPH-1, complete genomehypothetical protein1e-1170.9
NC_015723:430165:4425884425884436341047Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein2e-1170.1
NC_012792:310443:3171803171803181811002Variovorax paradoxus S110 chromosome 2, complete genomehypothetical protein6e-1168.6
NC_012587:2744731:274952427495242750504981Rhizobium sp. NGR234, complete genomehypothetical protein4e-1065.9
NC_015677:1460000:146301714630171463952936Ramlibacter tataouinensis TTB310 chromosome, complete genomeextracytoplasmic binding receptor7e-1065.1
NC_010002:4038500:4062470406247040634741005Delftia acidovorans SPH-1, complete genomehypothetical protein1e-0964.7
NC_012792:310443:329160329160330125966Variovorax paradoxus S110 chromosome 2, complete genomehypothetical protein1e-0964.3
NC_014532:2664139:268598626859862686966981Halomonas elongata DSM 2581, complete genomeputative Tripartite Tricarboxylate Transporter (TTT) protein, substrate binding protein2e-0963.5
NC_008786:3045770:3045770304577030470321263Verminephrobacter eiseniae EF01-2, complete genomeUncharacterized protein UPF00653e-0963.2
NC_002927:506183:552701552701553675975Bordetella bronchiseptica RB50, complete genomehypothetical protein3e-0963.2
NC_018524:4564493:457691445769144577864951Nocardiopsis alba ATCC BAA-2165 chromosome, complete genometripartite tricarboxylate transporter receptor family protein2e-0963.2
NC_008752:2056547:2071001207100120720021002Acidovorax avenae subsp. citrulli AAC00-1, complete genomeuncharacterized protein UPF00654e-0962.8
NC_002928:3781657:3783913378391337849441032Bordetella parapertussis 12822, complete genomehypothetical protein5e-0962.4
NC_002928:507749:551361551361552335975Bordetella parapertussis 12822, complete genomehypothetical protein5e-0962.4
NC_002927:1292573:130730613073061308283978Bordetella bronchiseptica RB50, complete genomehypothetical protein6e-0962
NC_015563:2702787:272152227215222722508987Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein8e-0961.6
NC_015726:406450:420801420801421787987Cupriavidus necator N-1 chromosome 1, complete sequenceextra-cytoplasmic solute receptor BugT1e-0861.2
NC_012791:4736084:4741736474173647427611026Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein1e-0860.8
NC_014931:5573942:558836455883645589356993Variovorax paradoxus EPS chromosome, complete genomehypothetical protein1e-0860.8
NC_016935:3819500:382155938215593822557999Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative transport protein1e-0860.8
NC_015690:3269000:327112632711263272124999Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative transport protein1e-0860.8
NC_014640:4193193:421341542134154214368954Achromobacter xylosoxidans A8 chromosome, complete genomeextra-cytoplasmic solute receptor family protein 922e-0860.5
NC_010170:1580832:158380415838041584787984Bordetella petrii, complete genomeputative secreted protein3e-0859.3
NC_008314:1825223:182775518277551828753999Ralstonia eutropha H16 chromosome 2, complete sequenceprobable extra-cytoplasmic solute receptor4e-0858.9
NC_013446:2164974:217965421796542180631978Comamonas testosteroni CNB-2, complete genomeTctC5e-0858.5
NC_007951:3631772:365219936521993653185987Burkholderia xenovorans LB400 chromosome 1, complete sequenceputative tricarboxylate transporter, periplasmic ligand binding protein (TctC subunit))1e-0757.4
NC_014640:6745873:679420467942046795184981Achromobacter xylosoxidans A8 chromosome, complete genomeextra-cytoplasmic solute receptor family protein 1782e-0756.6
NC_015677:1282865:128286512828651283824960Ramlibacter tataouinensis TTB310 chromosome, complete genomeextracytoplasmic binding receptor3e-0756.2
NC_007974:2048000:208908020890802090045966Ralstonia metallidurans CH34 chromosome 2, complete sequenceUncharacterized protein UPF00654e-0755.8
NC_014640:5897421:590302859030285904023996Achromobacter xylosoxidans A8 chromosome, complete genomeextra-cytoplasmic solute receptor family protein 1505e-0755.5
NC_015723:1047418:1063849106384910649131065Cupriavidus necator N-1 chromosome 2, complete sequenceextra-cytoplasmic solute receptor5e-0755.5
NC_011992:1912200:1913539191353919145431005Acidovorax ebreus TPSY, complete genomehypothetical protein9e-0754.7
NC_007336:66000:668076680767781975Ralstonia eutropha JMP134 megaplasmid, complete sequencehypothetical protein9e-0754.7
NC_015723:1448000:146176114617611462759999Cupriavidus necator N-1 chromosome 2, complete sequenceextra-cytoplasmic solute receptor1e-0654.7
NC_012791:2233098:223733622373362238310975Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein1e-0653.9
NC_015563:3266004:3268606326860632696101005Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein1e-0653.9
NC_008786:142797:1455771455771466621086Verminephrobacter eiseniae EF01-2, complete genomeUncharacterized protein UPF00652e-0653.5
NC_007974:785216:789641789641790603963Ralstonia metallidurans CH34 chromosome 2, complete sequenceUncharacterized protein UPF00655e-0652.4
NC_015727:1050500:106613810661381067109972Cupriavidus necator N-1 plasmid BB1p, complete sequenceextra-cytoplasmic solute receptor BugT5e-0652
NC_010002:4287439:430494243049424305940999Delftia acidovorans SPH-1, complete genomehypothetical protein6e-0652