Pre_GI: BLASTP Hits

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Query: NC_016582:1018014:1018014 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 1018014, End: 1019441, Length: 1428

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:755658:7707397707397721241386Pseudomonas putida F1, complete genomegluconate transporter3e-69263
NC_017986:3407913:3430736343073634321211386Pseudomonas putida ND6 chromosome, complete genomegluconate transporter9e-69261
NC_002947:737924:7601527601527615371386Pseudomonas putida KT2440, complete genomegluconate transporter1e-68260
NC_007492:3180480:3221373322137332227581386Pseudomonas fluorescens PfO-1, complete genomeGluconate transporter2e-66253
NC_015703:4531578:4535212453521245365281317Runella slithyformis DSM 19594 chromosome, complete genomegluconate transporter3e-41169
NC_011772:4763542:4766676476667647680011326Bacillus cereus G9842, complete genomegluconate permease7e-41168
NC_012472:4630485:4632872463287246341971326Bacillus cereus 03BB102, complete genomegluconate permease2e-40167
NC_008600:4626464:4628854462885446301791326Bacillus thuringiensis str. Al Hakam, complete genomegluconate permease2e-40167
NC_017200:4632000:4637153463715346384781326Bacillus thuringiensis serovar finitimus YBT-020 chromosome,gluconate permease3e-40166
NC_016641:4727000:4729601472960147309471347Paenibacillus terrae HPL-003 chromosome, complete genomegluconate permease3e-39163
NC_012483:30784:4424944249456131365Acidobacterium capsulatum ATCC 51196, complete genometransporter, gluconate:H+ symporter (GntP) family7e-36152
NC_010610:1178430:1219921121992112212671347Lactobacillus fermentum IFO 3956, complete genomegluconate transport protein2e-32140
NC_012912:242709:2603992603992617151317Dickeya zeae Ech1591, complete genomegluconate transporter6e-31135
NC_016027:1357659:1400153140015314014961344Gluconacetobacter xylinus NBRC 3288, complete genomegluconate permease2e-29130
NC_012125:4716000:4717083471708347184021320Salmonella enterica subsp. enterica serovar Paratyphi C strainGntP family, L-idonate transport protein3e-28126
NC_006905:4638707:4639769463976946412021434Salmonella enterica subsp. enterica serovar Choleraesuis strGntP family, L-idonate transport protein3e-28126
NC_011080:4703266:4704328470432847057191392Salmonella enterica subsp. enterica serovar Newport str. SL254,transporter, gluconate:H+ symporter (GntP) family3e-28126
NC_011205:4718239:4718239471823947196301392Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gluconate:H+ symporter family protein3e-28126
NC_016790:134951:1592071592071605951389Corynebacterium diphtheriae VA01 chromosome, complete genomegluconate permease6e-28125
NC_016801:170876:1976321976321990201389Corynebacterium diphtheriae C7 (beta) chromosome, complete genomegluconate permease6e-28125
NC_016513:317197:3250073250073263591353Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeGntT protein7e-28125
NC_013416:16493:2268922689240411353Aggregatibacter actinomycetemcomitans D11S-1, complete genomeGntT protein7e-28125
NC_016023:1874827:1884996188499618863421347Bacillus coagulans 36D1 chromosome, complete genomegluconate transporter8e-27122
NC_012691:241404:2532102532102545291320Tolumonas auensis DSM 9187, complete genomegluconate transporter1e-26121
NC_008563:4905186:4907858490785849091771320Escherichia coli APEC O1, complete genomeL-idonate and D-gluconate transporter1e-26121
NC_012967:4473368:4474433447443344757521320Escherichia coli B str. REL606 chromosome, complete genomeL-idonate and D-gluconate transporter1e-26121
NC_009641:2619759:2642311264231126436691359Staphylococcus aureus subsp. aureus str. Newman chromosome,gluconate permease2e-26120
NC_010079:2618345:2636416263641626377741359Staphylococcus aureus subsp. aureus USA300_TCH1516, completeGntP family gluconate:proton (H+) symporter2e-26120
NC_002758:2628000:2645900264590026472581359Staphylococcus aureus subsp. aureus Mu50, complete genomegluconate permease2e-26120
NC_003923:2561953:2584171258417125855291359Staphylococcus aureus subsp. aureus MW2, complete genomegluconate permease2e-26120
NC_002745:2553138:2575474257547425768321359Staphylococcus aureus subsp. aureus N315, complete genomegluconate permease2e-26120
NC_007795:2561928:2584907258490725862651359Staphylococcus aureus subsp. aureus NCTC 8325, complete genomegluconate permease, putative2e-26120
NC_002951:2554511:2572964257296425743221359Staphylococcus aureus subsp. aureus COL, complete genomegluconate transporter, permease protein2e-26120
NC_017337:2588331:2599424259942426007821359Staphylococcus aureus subsp. aureus ED133 chromosome, completegluconate permease2e-26120
NC_013450:2572530:2590340259034025916981359Staphylococcus aureus subsp. aureus ED98, complete genomegluconate transporter, permease protein2e-26120
NC_016912:2433500:2456118245611824574761359Staphylococcus aureus subsp. aureus VC40 chromosome, completegluconate transporter, permease protein2e-26120
NC_009632:2656296:2674131267413126754891359Staphylococcus aureus subsp. aureus JH1 chromosome, completegluconate transporter2e-26120
NC_009487:2656420:2674255267425526756131359Staphylococcus aureus subsp. aureus JH9 chromosome, completegluconate transporter2e-26120
NC_016928:2517691:2540118254011825414761359Staphylococcus aureus subsp. aureus M013 chromosome, completegluconate permease, Bsu4004-like protein2e-26120
NC_014210:4831858:4832956483295648343891434Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,gluconate transporter2e-26120
NC_017338:2558825:2576706257670625780641359Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeGntP family gluconate:proton (H+) symporter2e-26120
NC_017347:2616000:2631270263127026326281359Staphylococcus aureus subsp. aureus T0131 chromosome, completeGluconate permease2e-26120
NC_017343:2474743:2495553249555324969111359Staphylococcus aureus subsp. aureus ECT-R 2, complete genomegluconate permease2e-26120
NC_017341:2648631:2666532266653226678901359Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,GntP family gluconate:proton (H+) symporter2e-26120
NC_007622:2501562:2511931251193125132891359Staphylococcus aureus RF122, complete genomegluconate permease4e-26119
NC_017351:2594171:2611792261179226131501359Staphylococcus aureus subsp. aureus 11819-97 chromosome, completehigh-affinity gluconate transporter4e-26119
NC_017342:751496:7582557582557596131359Staphylococcus aureus subsp. aureus TCH60 chromosome, completegluconate:H+ symporter family transporter GntP7e-26118
NC_002952:2653482:2664202266420226655601359Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative gluconate permease7e-26118
NC_011274:4538722:4538722453872245399421221Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91GNT-II system l-idonate transporter4e-25116
NC_011294:4560902:4560902456090245621221221Salmonella enterica subsp. enterica serovar Enteritidis strgnt-II system l-idonate transporter4e-25116
NC_012214:3750649:3775990377599037773301341Erwinia pyrifoliae Ep1/96, complete genomeLow-affinity gluconate transporter4e-25116
NC_012581:1075663:1086709108670910880341326Bacillus anthracis str. CDC 684 chromosome, complete genomegluconate permease2e-24114
NC_016941:2498299:2521380252138025227381359Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative gluconate permease2e-23110
NC_010407:3174470:3187392318739231887921401Clavibacter michiganensis subsp. sepedonicus chromosome, completegluconate permease4e-23109
NC_013093:6511108:6511108651110865125021395Actinosynnema mirum DSM 43827, complete genomegluconate transporter5e-23109
NC_010498:2555706:2568667256866725700041338Escherichia coli SMS-3-5, complete genomegluconate:H+ symporter (GntP) family protein8e-23108
NC_011745:2751437:2752590275259027539271338Escherichia coli ED1a chromosome, complete genomepermease DsdX8e-23108
CP002797:2472908:2480464248046424818011338Escherichia coli NA114, complete genomeD-serine permease7e-23108
NC_007946:2625461:2639115263911526404521338Escherichia coli UTI89, complete genomehypothetical protein7e-23108
NC_008563:2610499:2611652261165226129891338Escherichia coli APEC O1, complete genomeDsdX permease7e-23108
NC_011750:2585015:2599649259964926009861338Escherichia coli IAI39 chromosome, complete genomepermease DsdX7e-23108
NC_011742:2533500:2534747253474725360841338Escherichia coli S88 chromosome, complete genomepermease DsdX7e-23108
NC_011750:4390000:4391185439118543925221338Escherichia coli IAI39 chromosome, complete genomepermease DsdX1e-22107
AC_000091:2462461:2483293248329324846301338Escherichia coli W3110 DNA, complete genomepredicted transporter4e-22106
NC_009800:2505872:2509252250925225105891338Escherichia coli HS, complete genometransporter, gluconate:H+ symporter (GntP) family4e-22106
NC_010473:2548946:2567634256763425689711338Escherichia coli str. K-12 substr. DH10B, complete genomepredicted transporter4e-22106
NC_000913:2455037:2475869247586924772061338Escherichia coli K12, complete genomepredicted transporter4e-22106
NC_012759:2342986:2361674236167423630111338Escherichia coli BW2952 chromosome, complete genomepermease DsdX4e-22106
NC_012967:2409500:2412074241207424134111338Escherichia coli B str. REL606 chromosome, complete genomepermease DsdX4e-22106
NC_004631:3809678:3829783382978338311201338Salmonella enterica subsp. enterica serovar Typhi Ty2, completeDsdX permease7e-22105
NC_003198:3824187:3844293384429338456301338Salmonella enterica subsp. enterica serovar Typhi str. CT18,DsdX permease7e-22105
NC_016832:3798475:3818580381858038199171338Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,DsdX permease7e-22105
NC_004431:2747237:2760235276023527615721338Escherichia coli CFT073, complete genomeDsdX permease7e-22105
NC_011274:3799696:3819796381979638211331338Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91permease DsdX6e-22105
NC_016831:3779611:3800627380062738019641338Salmonella enterica subsp. enterica serovar Gallinarum/pullorumDsdX permease6e-22105
NC_010003:570643:5872715872715886141344Petrotoga mobilis SJ95, complete genomegluconate transporter6e-22105
NC_006905:3942753:3942753394275339440901338Salmonella enterica subsp. enterica serovar Choleraesuis strputative Gnt family transport protein5e-22105
NC_010519:796229:7962297962297975781350Haemophilus somnus 2336 chromosome, complete genomegluconate transporter2e-21104
NC_008309:385592:3877233877233890571335Haemophilus somnus 129PT, complete genomegluconate permease4e-21102
NC_009901:4216206:4217550421755042188871338Shewanella pealeana ATCC 700345, complete genomegluconate transporter7e-2099
CP002516:4199133:4199133419913342004761344Escherichia coli KO11, complete genomegluconate transporter3e-1997.1
AC_000091:4534935:4554633455463345559761344Escherichia coli W3110 DNA, complete genomefructuronate transporter3e-1997.1
NC_009801:4882684:4906902490690249082451344Escherichia coli E24377A, complete genomehigh-affinity gluconate transporter GntP3e-1997.1
NC_010498:4930649:4954576495457649559191344Escherichia coli SMS-3-5, complete genomehigh-affinity gluconate transporter GntP3e-1997.1
CP002185:4791811:4812394481239448137371344Escherichia coli W, complete genomefructuronate transporter3e-1997.1
CU928160:4570498:4610595461059546119381344Escherichia coli IAI1 chromosome, complete genomefructuronate transporter3e-1997.1
NC_000913:4528278:4547976454797645493191344Escherichia coli K12, complete genomefructuronate transporter3e-1997.1
NC_002695:5381576:5404775540477554061181344Escherichia coli O157:H7 str. Sakai, complete genomegluconate transport system permease 33e-1997.1
NC_016822:4889656:4911895491189549132381344Shigella sonnei 53G, complete genomefructuronate transporter3e-1997.1
NC_020064:521500:5235865235865249711386Serratia marcescens FGI94, complete genomegluconate transporter3e-1997.1
CP002797:4656327:4677849467784946791921344Escherichia coli NA114, complete genomeFructuronate transporter3e-1997.1
NC_011353:5455224:5478423547842354797661344Escherichia coli O157:H7 str. EC4115 chromosome, complete genomefructuronate transporter3e-1997.1
NC_011741:4570498:4610595461059546119381344Escherichia coli IAI1 chromosome, complete genomefructuronate transporter3e-1997.1
NC_016832:4649432:4652861465286146543511491Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Gnt-II system L-idonate transporter2e-1997.1
NC_004631:4661000:4664781466478146662711491Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-1997.1
NC_003198:4676536:4681892468189246833821491Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1997.1
NC_004741:4364235:4364235436423543655781344Shigella flexneri 2a str. 2457T, complete genomegluconate transport system permease 33e-1997.1
NC_011750:4978000:4997413499741349987561344Escherichia coli IAI39 chromosome, complete genomefructuronate transporter3e-1997.1
NC_016902:4199133:4199133419913342004761344Escherichia coli KO11FL chromosome, complete genomegluconate transporter3e-1997.1
NC_013941:5219841:5243056524305652443991344Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHigh-affinity gluconate transporter3e-1997.1
NC_013008:5411285:5434484543448454358271344Escherichia coli O157:H7 str. TW14359 chromosome, complete genomefructuronate transporter3e-1997.1
NC_012967:4510393:4530867453086745322101344Escherichia coli B str. REL606 chromosome, complete genomefructuronate transporter3e-1997.1
NC_011742:4873351:4892706489270648940491344Escherichia coli S88 chromosome, complete genomefructuronate transporter3e-1997.1
NC_004431:5123325:5144682514468251460251344Escherichia coli CFT073, complete genomeHigh-affinity gluconate transporter4e-1996.3
NC_020063:3690308:3723033372303337243641332Enterobacteriaceae bacterium strain FGI 57, complete genomeD-fructuronate permease9e-1892
NC_020210:3341976:3367120336712033684901371Geobacillus sp. GHH01, complete genomegluconate transporter1e-1791.7
NC_008593:640000:6538316538316552011371Clostridium novyi NT, complete genomegluconate permease2e-1790.9
NC_011283:2836000:2857599285759928589631365Klebsiella pneumoniae 342 chromosome, complete genomepermease4e-1790.1
NC_011283:2836000:2840671284067128420351365Klebsiella pneumoniae 342 chromosome, complete genomepermease4e-1790.1
NC_013850:2846069:2847534284753428488981365Klebsiella variicola At-22 chromosome, complete genomegluconate transporter4e-1790.1
NC_012125:2938519:2989554298955429910501497Salmonella enterica subsp. enterica serovar Paratyphi C strainpermease2e-1687.4
NC_006511:2819128:2868557286855728700531497Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible permease2e-1687.4
NC_011147:2814664:2864093286409328655891497Salmonella enterica subsp. enterica serovar Paratyphi A strpermease2e-1687.4
NC_016831:2867766:2917572291757229190681497Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative permease4e-1686.7
NC_004631:2872192:2891874289187428933701497Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible permease4e-1686.7
NC_011080:2982346:3033797303379730352931497Salmonella enterica subsp. enterica serovar Newport str. SL254,GntP4e-1686.7
NC_011149:2912219:2965705296570529672011497Salmonella enterica subsp. enterica serovar Agona str. SL483,GntP4e-1686.7
NC_010102:2967464:3020267302026730217631497Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-1686.7
NC_011094:2913500:2960886296088629623821497Salmonella enterica subsp. enterica serovar Schwarzengrund strGntP protein4e-1686.7
NC_011294:2919906:2940308294030829418041497Salmonella enterica subsp. enterica serovar Enteritidis strpermease4e-1686.7
NC_016832:2859491:2879171287917128806671497Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,putative permease4e-1686.7
NC_003197:3005842:3055549305554930570451497Salmonella typhimurium LT2, complete genomeputative permease4e-1686.3
NC_016810:3028421:3078125307812530796211497Salmonella enterica subsp. enterica serovar Typhimurium strpermease4e-1686.3
NC_016856:3026426:3075786307578630772821497Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative permease4e-1686.3
NC_016857:3028421:3078125307812530796211497Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74GntP protein4e-1686.3
NC_016860:3029272:3078979307897930804751497Salmonella enterica subsp. enterica serovar Typhimurium strputative permease4e-1686.3
NC_016863:2974333:3024038302403830255341497Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative permease4e-1686.3
NC_017046:3027161:3076865307686530783611497Salmonella enterica subsp. enterica serovar Typhimurium str. 798permease4e-1686.3
NC_019978:1022209:1022209102220910235401332Halobacteroides halobius DSM 5150, complete genomegluconate transporter5e-1376.3
NC_009801:3013838:3040983304098330423471365Escherichia coli E24377A, complete genometransporter, gluconate:H+ symporter (GntP) family8e-1375.5
NC_009922:2721343:2746677274667727480531377Alkaliphilus oremlandii OhILAs, complete genomegluconate transporter1e-1274.7
NC_010545:2025000:2025091202509120264911401Corynebacterium urealyticum DSM 7109, complete genomegluconate permease3e-0963.9
NC_016077:388941:3970783970783984631386Acidaminococcus intestini RyC-MR95 chromosome, complete genomegluconate transporter5e-0963.2
NC_013521:2924540:2924540292454029259071368Sanguibacter keddieii DSM 10542, complete genomeH+/gluconate symporter family protein8e-0858.9
NC_014253:431942:4339964339964352821287Methanohalobium evestigatum Z-7303 chromosome, complete genomegluconate transporter4e-0653.1