Pre_GI: BLASTP Hits

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Query: NC_016582:10159486:10192635 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10192635, End: 10195166, Length: 2532

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016582:10227196:1024942310249423102519992577Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein0913
NC_002570:1195356:1201603120160312044072805Bacillus halodurans C-125, complete genomehypothetical protein0897
NC_019897:1224798:1260174126017412624652292Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein0835
NC_010001:434803:4348034348034372142412Clostridium phytofermentans ISDg, complete genomeFG-GAP repeat protein0740
NC_016047:876875:8851438851438869811839Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeFG-GAP repeat domain-containing protein6e-79296
NC_020244:783125:7894507894507912671818Bacillus subtilis XF-1, complete genomehypothetical protein8e-79295
NC_014479:736102:7424377424377442451809Bacillus subtilis subsp. spizizenii str. W23 chromosome, completepolysaccharide lyase2e-78294
NC_017195:742298:7496597496597514971839Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeFG-GAP repeat domain protein2e-78294
NC_000964:764118:7714797714797733171839Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein5e-78293
NC_014976:2981777:2990066299006629918831818Bacillus subtilis BSn5 chromosome, complete genomepolysaccharide lyase9e-78292
NC_002570:1195356:1205572120557212087633192Bacillus halodurans C-125, complete genomehypothetical protein5e-77289
NC_014479:736102:7405167405167423601845Bacillus subtilis subsp. spizizenii str. W23 chromosome, completepolysaccharide lyase; lipoprotein7e-76285
NC_014976:2981777:2988154298815429899981845Bacillus subtilis BSn5 chromosome, complete genomepolysaccharide lyase1e-75285
NC_019896:3281193:3292046329204632939081863Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein2e-75284
CP002207:227118:2335262335262353131788Bacillus atrophaeus 1942, complete genomepolysaccharide lyase2e-75284
NC_014639:227118:2335262335262353131788Bacillus atrophaeus 1942 chromosome, complete genomepolysaccharide lyase2e-75284
NC_016047:876875:8832528832528850961845Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeFG-GAP repeat domain-containing protein2e-75284
NC_000964:764118:7695717695717714331863Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein4e-75283
NC_017195:742298:7477697477697496131845Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeFG-GAP repeat domain protein4e-75283
NC_020244:783125:7875967875967893831788Bacillus subtilis XF-1, complete genomepolysaccharide lyase; lipoprotein5e-75283
UCMB5137:303641:3110773110773128941818Bacillus atrophaeus UCMB-5137polysaccharide lyase4e-74280
UCMB5137:303641:3091533091533110031851Bacillus atrophaeus UCMB-5137BATR1942_01110; polysaccharide lyase; lipoprotein; (location [231571:233422] strand +); from Bacillus atrophaeus 1942, complete genome. [CP002207]3e-72274
NC_012034:1925983:1929397192939719318982502Anaerocellum thermophilum DSM 6725, complete genomeCellulose 1,4-beta-cellobiosidase5e-72273
NC_016641:2700765:2700765270076527026301866Paenibacillus terrae HPL-003 chromosome, complete genomepolysaccharide lyase1e-71271
CP002207:227118:2315722315722334221851Bacillus atrophaeus 1942, complete genomepolysaccharide lyase; lipoprotein3e-71270
NC_014639:227118:2315722315722334221851Bacillus atrophaeus 1942 chromosome, complete genomepolysaccharide lyase3e-71270
NC_015949:2418232:2449421244942124530593639Caldicellulosiruptor lactoaceticus 6A chromosome, complete genometype 3a cellulose-binding domain-containing protein1e-70268
NC_015949:6336:2449424494297945301Caldicellulosiruptor lactoaceticus 6A chromosome, complete genometype 3a cellulose-binding domain-containing protein2e-70268
NC_011898:851892:8604348604348624642031Clostridium cellulolyticum H10, complete genomecellulosome protein dockerin type I7e-70266
NC_014655:2581968:2591047259104725930562010Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein3e-67257
NC_014393:1221000:1235585123558512381072523Clostridium cellulovorans 743B chromosome, complete genomeDockerin type 13e-64247
NC_019896:3281193:3290491329049132919991509Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein9e-56219
NC_015690:4469775:450747545074754507810336Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYesX3e-1481.3