Pre_GI: BLASTP Hits

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Query: NC_016582:10104458:10110633 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10110633, End: 10110989, Length: 357

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016582:1639375:1670249167024916713461098Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-45180
NC_015957:7301546:7310381731038173114781098Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit6e-43172
NC_009142:5698100:571334257133425713839498Saccharopolyspora erythraea NRRL 2338, complete genomeintegrase3e-42170
NC_015957:7249873:727166572716657272381717Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit4e-41166
NC_016582:1639375:166057716605771661089513Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase1e-40165
NC_015957:7348269:736766073676607368379720Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-40164
NC_016582:10227196:102306371023063710231404768Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit2e-39160
NC_019673:3041936:304944930494493050132684Saccharothrix espanaensis DSM 44229 complete genomeIntegrase6e-38155
NC_016582:10326938:1035565010355650103567411092Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit6e-36149
NC_015957:7408466:7435711743571174368021092Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-35147
NC_016582:11878078:1188672811886728118878011074Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-34144
NC_016582:1707756:172005317200531720457405Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase2e-33141
NC_015957:7408466:743524374352437435677435Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit3e-33140
NC_016582:11535695:115450311154503111545480450Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase4e-31133
NC_016582:1639375:165253416525341652938405Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase3e-29126
NC_016582:11734963:117419241174192411742577654Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit5e-29126
NC_015957:7348269:738439173843917384720330Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein2e-21100
NC_016582:1639375:167282616728261673122297Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase3e-2097.1
NC_016582:10326938:1033994510339945103410241080Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-1890.9
NC_009921:5331565:533156553315655332086522Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-1890.9
NC_009921:1668306:1700587170058717016931107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-1890.1
NC_009921:3551036:3572412357241235735181107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region5e-1889.7
NC_009921:4035225:4044349404434940454551107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region5e-1889.7
NC_009921:3854969:3864152386415238652221071Frankia sp. EAN1pec, complete genomeIntegrase catalytic region9e-1889
NC_009921:465683:4808934808934819991107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region1e-1788.6
NC_009921:522000:5221705221705232761107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-1787.8
NC_015957:7348269:7384650738465073857621113Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit3e-1684
NC_016582:1639375:166180316618031662237435Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-1684
NC_009921:5202607:5221516522151652227031188Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-1684
NC_009380:4702815:471160147116014712491891Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein5e-1683.2
NC_016582:10159486:101839421018394210184514573Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region6e-1682.8
NC_016582:10326938:103388221033882210339559738Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-1581.6
NC_016582:11920331:1193134011931340119324521113Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-1580.5
NC_016582:10227196:102563301025633010256902573Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region6e-1579.7
NC_015957:7533000:754114375411437541877735Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1478.6
NC_009921:565947:576413576413576805393Frankia sp. EAN1pec, complete genomeputative transposase2e-1477.8
NC_009921:4035225:403953840395384040437900Frankia sp. EAN1pec, complete genomeIntegrase catalytic region5e-1476.6
NC_016582:1751988:176704117670411767985945Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region8e-1475.9
NC_015957:7408466:7445734744573474468641131Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit6e-1475.9
NC_016582:1707756:171886917188691719864996Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region6e-1475.9
NC_013131:621366:6389796389796400521074Catenulispora acidiphila DSM 44928, complete genomeIntegrase catalytic region1e-1374.7
NC_015957:6859259:6867186686718668682681083Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-1374.3
NC_009921:8147947:8154281815428181553481068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-1373.9
NC_009921:3551036:3568885356888535699521068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-1373.6
NC_019673:2051363:211413521141352115091957Saccharothrix espanaensis DSM 44229 complete genomeIntegrase, catalytic subunit4e-1373.6
NC_009921:565947:5692265692265703051080Frankia sp. EAN1pec, complete genomeIntegrase catalytic region1e-1272
NC_017186:6395435:646032164603216460869549Amycolatopsis mediterranei S699 chromosome, complete genomeintegrase1e-1272
NC_014318:6395392:646027764602776460825549Amycolatopsis mediterranei U32 chromosome, complete genomeputative integrase1e-1272
NC_015957:7249873:727039172703917271188798Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit1e-1271.6
NC_016582:10159486:102029131020291310203428516Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-1270.9
NC_009921:522000:5538505538505549171068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-1270.5
NC_015957:7301546:730644173064417307397957Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit3e-1270.5
NC_009921:522000:5591945591945602611068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region4e-1270.1
NC_016582:2009588:201909020190902019503414Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region5e-1269.7
NC_009921:8147947:816043281604328161139708Frankia sp. EAN1pec, complete genomeIntegrase catalytic region7e-1269.3
NC_009921:5202607:524333152433315243849519Frankia sp. EAN1pec, complete genomehypothetical protein1e-1168.6
NC_009921:8549757:8553073855307385540741002Frankia sp. EAN1pec, complete genomeIntegrase catalytic region1e-1168.2
NC_015957:7301546:7302863730286373038971035Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-1167.8
NC_016582:11878078:118879981188799811888642645Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-1167.8
NC_016582:1707756:1726558172655817276251068Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-1167.8
NC_016582:1639375:166690516669051667873969Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-1167
NC_016582:10227196:1026081410260814102618931080Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region4e-1167
NC_019673:6362458:637392763739276374445519Saccharothrix espanaensis DSM 44229 complete genomeIntegrase1e-1065.5
NC_009921:5508000:5511758551175855127861029Frankia sp. EAN1pec, complete genomehypothetical protein2e-1064.7
NC_015957:7348269:738583073858307386612783Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1063.9
NC_008510:3189349:3198358319835831993891032Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, unnamed13e-1063.5
NC_016582:10326938:103342551033425510334638384Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transposase8e-1062.4
NC_016582:1751988:177133117713311772044714Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0960.8
NC_016582:10326938:1032823310328233103292881056Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-0960.5
NC_009921:565947:580591580591580881291Frankia sp. EAN1pec, complete genomeputative transposase1e-0858.5
NC_021184:4524500:452522845252284526019792Desulfotomaculum gibsoniae DSM 7213, complete genome1e-0755.1
NC_013440:1131376:113753611375361138090555Haliangium ochraceum DSM 14365, complete genome1e-0755.1
NC_016582:11878078:118930241189302411893827804Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-0753.9
NC_009253:3272000:3283650328365032847441095Desulfotomaculum reducens MI-1 chromosome, complete genomeintegrase catalytic subunit8e-0752.4
NC_015957:7348269:737365873736587373957300Streptomyces violaceusniger Tu 4113 chromosome, complete genome9e-0752.4
NC_012108:4971086:500053150005315001496966Desulfobacterium autotrophicum HRM2, complete genomeTranposase9e-0752.4
NC_005823:3487108:349172234917223492231510Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130hypothetical protein2e-0651.6
NC_013440:1480855:149309714930971493552456Haliangium ochraceum DSM 14365, complete genome3e-0650.8
NC_008510:3189349:320197132019713202969999Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, IS1477-like4e-0650.1