Pre_GI: BLASTP Hits

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Query: NC_016582:10104458:10110354 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10110354, End: 10110614, Length: 261

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016582:1639375:1670249167024916713461098Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein5e-37152
NC_015957:7301546:7310381731038173114781098Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit1e-36151
NC_016582:1751988:177133117713311772044714Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-35147
NC_016582:10227196:102306371023063710231404768Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit4e-34142
NC_016582:11878078:1188672811886728118878011074Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein7e-32135
NC_019673:3041936:304944930494493050132684Saccharothrix espanaensis DSM 44229 complete genomeIntegrase1e-31134
NC_016582:11920331:119284311192843111929069639Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-31134
NC_015957:7249873:727166572716657272381717Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit3e-31133
NC_016582:10326938:1035565010355650103567411092Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit3e-30130
NC_015957:7408466:7435711743571174368021092Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-29127
NC_015957:7348269:736766073676607368379720Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit3e-29127
NC_009380:4702815:471160147116014712491891Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein6e-29125
NC_016582:11734963:117419241174192411742577654Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic subunit7e-23105
NC_009921:4035225:4044349404434940454551107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region7e-2199
NC_009921:465683:4808934808934819991107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-2097.8
NC_009921:3551036:3572412357241235735181107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region5e-2096.3
NC_009921:5202607:5221516522151652227031188Frankia sp. EAN1pec, complete genomeIntegrase catalytic region1e-1995.1
NC_015957:7408466:7445734744573474468641131Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-1994.7
NC_009921:522000:5221705221705232761107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-1994.4
NC_015957:7301546:7302863730286373038971035Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit3e-1994
NC_009921:3854969:3864152386415238652221071Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-1993.6
NC_015957:6859259:6867186686718668682681083Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit3e-1993.6
NC_016582:1639375:167238616723861672601216Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein4e-1993.2
NC_016582:1639375:166690516669051667873969Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region5e-1992.8
NC_016582:1707756:171886917188691719864996Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region7e-1992.4
NC_016582:11878078:118930241189302411893827804Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-1891.3
NC_016582:10227196:1026081410260814102618931080Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-1890.9
NC_009921:1668306:1700587170058717016931107Frankia sp. EAN1pec, complete genomeIntegrase catalytic region4e-1890.1
NC_016582:1751988:176704117670411767985945Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-1787
NC_015957:7249873:727039172703917271188798Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit5e-1786.3
NC_015957:7301546:730644173064417307397957Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit8e-1785.5
NC_016582:10326938:103466781034667810347607930Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-1685.5
NC_015957:7348269:7384650738465073857621113Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit1e-1685.5
NC_016582:10326938:1033994510339945103410241080Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-1684.7
NC_016582:10326938:103388221033882210339559738Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region9e-1682
NC_016582:11920331:1193134011931340119324521113Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region1e-1581.6
NC_016582:11535695:115444651154446511544953489Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region6e-1579.3
NC_015957:7533000:754114375411437541877735Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1478.2
NC_016582:11878078:118879981188799811888642645Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-1374.3
NC_015957:7348269:738583073858307386612783Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-1372.8
NC_009921:3551036:3568885356888535699521068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-1270.1
NC_009921:8549757:8553073855307385540741002Frankia sp. EAN1pec, complete genomeIntegrase catalytic region6e-1269.7
NC_009921:522000:5538505538505549171068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-1168.2
NC_013131:621366:6389796389796400521074Catenulispora acidiphila DSM 44928, complete genomeIntegrase catalytic region2e-1168.2
NC_016582:10326938:1032823310328233103292881056Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region3e-1167.4
NC_009921:4035225:403953840395384040437900Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-1167.4
NC_016582:1707756:1726558172655817276251068Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase catalytic region2e-1167.4
NC_009921:8147947:8154281815428181553481068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region4e-1167
NC_016582:1639375:166112416611241661675552Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein4e-1166.6
NC_009921:522000:5591945591945602611068Frankia sp. EAN1pec, complete genomeIntegrase catalytic region6e-1165.9
NC_009921:565947:576808576808577452645Frankia sp. EAN1pec, complete genomehypothetical protein3e-0857
NC_008576:3307297:3324318332431833253851068Magnetococcus sp. MC-1, complete genomehypothetical protein5e-0856.6
NC_009253:3272000:3283650328365032847441095Desulfotomaculum reducens MI-1 chromosome, complete genomeintegrase catalytic subunit1e-0755.1
NC_009921:565947:5692265692265703051080Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-0754.7
NC_016582:1639375:166057716605771661089513Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase2e-0754.3
NC_019673:2051363:211413521141352115091957Saccharothrix espanaensis DSM 44229 complete genomeIntegrase, catalytic subunit2e-0754.3
NC_009921:8147947:816043281604328161139708Frankia sp. EAN1pec, complete genomeIntegrase catalytic region6e-0753.1
NC_021184:4524500:452522845252284526019792Desulfotomaculum gibsoniae DSM 7213, complete genome3e-0650.8
NC_013131:7401253:741431574143157414974660Catenulispora acidiphila DSM 44928, complete genome7e-0649.3