Pre_GI: BLASTP Hits

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Query: NC_016582:10104458:10108096 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10108096, End: 10109037, Length: 942

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011969:1816746:183784118378411838764924Bacillus cereus Q1 chromosome, complete genomealpha/beta fold family hydrolase2e-43176
NC_017294:1385576:140355214035521404343792Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomealpha/beta hydrolase2e-1170.1
NC_015389:905165:921879921879922823945Coriobacterium glomerans PW2 chromosome, complete genomealpha/beta hydrolase fold protein2e-32139
NC_015913:1422444:143715614371561437947792Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomealpha/beta hydrolase fold protein2e-1170.1
NC_011901:1122357:1140412114041211414491038Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completealpha/beta hydrolase fold protein1e-0861.2
NC_016012:1312352:132704813270481327815768Candidatus Arthromitus sp. SFB-rat-Yit, complete genomealpha/beta hydrolase fold protein3e-1065.9
NC_014314:755166:777041777041777901861Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completealpha/beta hydrolase fold protein6e-1478.6
NC_018697:618832:633409633409634251843Cycloclasticus sp. P1 chromosome, complete genomeAlpha/beta hydrolase fold-1 domain-containing protein1e-0757.4
NC_008027:4280000:428221942822194283163945Pseudomonas entomophila L48, complete genomehydrolase, alpha/beta fold family5e-50198
NC_008261:2481500:249271924927192493639921Clostridium perfringens ATCC 13124, complete genomehydrolase, alpha/beta fold family2e-41169
NC_008262:2150944:216197921619792162905927Clostridium perfringens SM101, complete genomehydrolase, alpha/beta fold family1e-41170
NC_003366:2266757:227888622788862279806921Clostridium perfringens str. 13, complete genomehypothetical protein3e-41169
NC_015683:2176156:218234721823472183183837Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein1e-0653.9
NC_016052:1818659:181865918186591819570912Tetragenococcus halophilus NBRC 12172, complete genomehypothetical protein2e-21103
NC_014483:1431352:1453478145347814544851008Paenibacillus polymyxa E681 chromosome, complete genomeLysophospholipase2e-44179
NC_014833:3268102:3289975328997532909791005Ruminococcus albus 7 chromosome, complete genomelysophospholipase1e-33144
NC_017098:1278712:128365212836521284581930Spirochaeta africana DSM 8902 chromosome, complete genomelysophospholipase4e-37155
NC_008510:2605500:262145426214542622401948Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Lysophospholipase3e-1065.9
NC_014150:2055907:207658820765882077520933Brachyspira murdochii DSM 12563 chromosome, complete genomelysophospholipase8e-38157
NC_019697:1667908:168960216896021690450849Chamaesiphon minutus PCC 6605, complete genomelysophospholipase4e-1789
NC_008508:2572450:258819525881952589142948Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,Lysophospholipase3e-1065.9
NC_014323:3669704:368918136891813690029849Herbaspirillum seropedicae SmR1 chromosome, complete genomelysophospholipase5e-0858.5
NC_014656:1536540:1562563156256315636541092Bifidobacterium longum subsp. longum BBMN68 chromosome, completepldb4e-0755.8
NC_007333:1559321:156214815621481562984837Thermobifida fusca YX, complete genomeputative lipase2e-2099.8
NC_021064:31816:4019440194413181125Propionibacterium avidum 44067, complete genomeputative lysophospholipase2e-1790.1
NC_014550:3263783:327360532736053274549945Arthrobacter arilaitensis Re117, complete genomeputative lysophospholipase9e-23107