Query: NC_016446:979884 Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete
Start: 979884, End: 1004820, Length: 24937
Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria
General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_002506:207097* | 207097 | 232054 | 24958 | Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete | 0 | 48950 | BLASTN svg | BLASTP svg |
NC_002506:370629 | 370629 | 439828 | 69200 | Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete | 0 | 1229 | BLASTN svg | BLASTP svg |
NC_002505:238569 | 238569 | 274146 | 35578 | Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete | 3e-92 | 347 | BLASTN svg | BLASTP svg |
NC_004347:1038253* | 1038253 | 1070537 | 32285 | Shewanella oneidensis MR-1, complete genome | 9e-25 | 123 | BLASTN svg | BLASTP svg |
NC_013961:2932348 | 2932348 | 2956977 | 24630 | Erwinia amylovora, complete genome | 4e-21 | 111 | BLASTN svg | BLASTP svg |
NC_013457:979102* | 979102 | 998316 | 19215 | Vibrio sp. Ex25 chromosome 2, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_012691:2614603* | 2614603 | 2727599 | 112997 | Tolumonas auensis DSM 9187, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_013508:1862896 | 1862896 | 1886070 | 23175 | Edwardsiella tarda EIB202, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_008577:1885809* | 1885809 | 1907187 | 21379 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_009348:161244 | 161244 | 179220 | 17977 | Aeromonas salmonicida subsp. salmonicida A449, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_014364:2562281* | 2562281 | 2584986 | 22706 | Spirochaeta smaragdinae DSM 11293 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009997:3583166 | 3583166 | 3602654 | 19489 | Shewanella baltica OS195, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |