Pre_GI: BLASTN Hits

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Query: NC_016446:119914 Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete

Start: 119914, End: 140369, Length: 20456

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009348:3819271*3819271384615626886Aeromonas salmonicida subsp. salmonicida A449, complete genome3e-24121BLASTN svgBLASTP svg
NC_015424:25107642510764253353522772Aeromonas veronii B565 chromosome, complete genome7e-59236BLASTN svgBLASTP svg
NC_012108:49710864971086502487253787Desulfobacterium autotrophicum HRM2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014836:15519651551965158996538001Desulfurispirillum indicum S5 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013592:32630053263005329243329429Dickeya dadantii Ech586, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013961:73037*7303710749134455Erwinia amylovora, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014306:35249803524980358375158772Erwinia billingiae Eb661, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014306:31020003102000312424122242Erwinia billingiae Eb661, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014541:2510819*2510819253430723489Ferrimonas balearica DSM 9799 chromosome, complete genome8e-31143BLASTN svgBLASTP svg
NC_009999:38832388326239723566Shewanella baltica OS195 plasmid pS19502, complete sequence4e-1177.8BLASTN svgBLASTP svg
NC_009997:51882215188221522795839738Shewanella baltica OS195, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_009997:26996442699644272218322540Shewanella baltica OS195, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008345:37569773756977377563418658Shewanella frigidimarina NCIMB 400, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_011566:47096724709672473260322932Shewanella piezotolerans WP3, complete genome1e-60242BLASTN svgBLASTP svg
NC_008577:1885809*1885809190718721379Shewanella sp. ANA-3 chromosome 1, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_012691:779826*77982680263722812Tolumonas auensis DSM 9187, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015633:2565753*2565753261159945847Vibrio anguillarum 775 chromosome chromosome I, complete sequence02020BLASTN svgBLASTP svg
NC_002505:19317501931750195259920850Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete02460BLASTN svgBLASTP svg
NC_002505:23856923856927414635578Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete02452BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete2e-31145BLASTN svgBLASTP svg
NC_002506:37062937062943982869200Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete040260BLASTN svgBLASTP svg
NC_002506:32455232455235839733846Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete02387BLASTN svgBLASTP svg
NC_002506:82240182240184494222542Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete2e-0765.9BLASTN svgBLASTP svg
NC_002506:207097*20709723205424958Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete01229BLASTN svgBLASTP svg
NC_002506:298868*29886831909920232Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete3e-166593BLASTN svgBLASTP svg
NC_009783:16656101665610168785322244Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_004603:18975321897532193607538544Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete7e-53216BLASTN svgBLASTP svg
NC_004603:37032037032039589225573Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete5e-26127BLASTN svgBLASTP svg
NC_013456:17430461743046176911826073Vibrio sp. Ex25 chromosome 1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013456:1819421*1819421184038720967Vibrio sp. Ex25 chromosome 1, complete genome3e-55224BLASTN svgBLASTP svg
NC_013456:1843000*1843000186410221103Vibrio sp. Ex25 chromosome 1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004459:349500*34950040074451245Vibrio vulnificus CMCP6 chromosome I, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_004459:2443000*24430002588599145600Vibrio vulnificus CMCP6 chromosome I, complete sequence6e-118432BLASTN svgBLASTP svg
NC_004460:16188921618892163876819877Vibrio vulnificus CMCP6 chromosome II, complete sequence1e-60242BLASTN svgBLASTP svg
NC_005139:2201820*2201820227810176282Vibrio vulnificus YJ016 chromosome I, complete sequence4e-1487.7BLASTN svgBLASTP svg
NC_005139:178400017840001927839143840Vibrio vulnificus YJ016 chromosome I, complete sequence6e-47196BLASTN svgBLASTP svg
NC_005140:34000034000036232922330Vibrio vulnificus YJ016 chromosome II, complete sequence1e-60242BLASTN svgBLASTP svg