Pre_GI: BLASTP Hits

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Query: NC_016446:522936:532427 Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete

Start: 532427, End: 532588, Length: 162

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:504534:513776513776513937162Vibrio cholerae MJ-1236 chromosome 2, complete genomephage integrase3e-24110
NC_012583:861225:870719870719870880162Vibrio cholerae O395 chromosome chromosome II, complete sequenceintegrase-related protein3e-24110
NC_012580:796387:805881805881806042162Vibrio cholerae M66-2 chromosome II, complete sequenceintegrase-like protein3e-24110
NC_009456:383819:393062393062393223162Vibrio cholerae O395 chromosome 1, complete sequenceintegrase-related protein3e-24110
NC_002506:822401:831895831895832056162Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeintegrase-related protein3e-24110
NC_016945:822229:831744831744831881138Vibrio cholerae IEC224 chromosome II, complete sequenceintegrase-like protein3e-1993.6