Pre_GI: BLASTP Hits

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Query: NC_016445:2938887:2972303 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2972303, End: 2973388, Length: 1086

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006177:1060428:1081321108132110824751155Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein3e-0756.6
NC_014562:2563466:2606374260637426074741101Pantoea vagans C9-1 chromosome, complete genomeputative hydrogenase subunit2e-64246
NC_015674:1562968:1577594157759415787151122Helicobacter bizzozeronii CIII-1, complete genometRNA pseudouridine 13 synthase6e-1892
NC_016051:1129154:1133554113355411348011248Thermococcus sp. AM4 chromosome, complete genometRNA pseudouridine synthase D1e-1171.2
NC_000868:571500:5890735890735902931221Pyrococcus abyssi GE5, complete genometRNA pseudouridine synthase D6e-1065.5
NC_011296:530408:5316835316835328551173Thermodesulfovibrio yellowstonii DSM 11347, complete genometRNA pseudouridine synthase D2e-1273.9
NC_010995:2547164:2556444255644425574541011Cellvibrio japonicus Ueda107, complete genometRNA pseudouridine synthase D2e-45183
NC_003413:1448377:1451335145133514525581224Pyrococcus furiosus DSM 3638, complete genometRNA pseudouridine synthase D5e-1375.5
NC_000961:1366000:1367672136767213689011230Pyrococcus horikoshii OT3, complete genometRNA pseudouridine synthase D4e-1169.3
NC_004578:1719849:1723431172343117244891059Pseudomonas syringae pv. tomato str. DC3000, complete genometRNA pseudouridine synthase D6e-49194
NC_015474:105075:1080311080311092451215Pyrococcus sp. NA2 chromosome, complete genometRNA pseudouridine synthase D2e-1170.5
NC_017187:691769:7137877137877148511065Arcobacter butzleri ED-1, complete genometRNA pseudouridine synthase D4e-28125
NC_010468:1029471:1052580105258010536291050Escherichia coli ATCC 8739, complete genometRNA pseudouridine synthase D TruD3e-70265
NC_014761:1196669:1213985121398512150611077Oceanithermus profundus DSM 14977 chromosome, complete genometRNA pseudouridine synthase d trud3e-31136
NC_014973:3151701:3165220316522031664161197Geobacter sp. M18 chromosome, complete genometRNA pseudouridine synthase D TruD1e-1894
NC_013158:2714778:2736794273679427381521359Halorhabdus utahensis DSM 12940, complete genometRNA pseudouridine synthase D TruD5e-1065.9
NC_012918:1697860:1701910170191017031061197Geobacter sp. M21 chromosome, complete genometRNA pseudouridine synthase D TruD5e-1995.5
NC_014935:1223817:1222711122271112238201110Nitratifractor saLSUginis DSM 16511 chromosome, complete genometRNA pseudouridine synthase d trud7e-2098.6
NC_014148:4037357:4037357403735740386551299Planctomyces limnophilus DSM 3776 chromosome, complete genometRNA pseudouridine synthase D TruD4e-0859.7