Pre_GI: BLASTP Hits

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Query: NC_016445:2938887:2971797 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2971797, End: 2972273, Length: 477

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014562:2563466:260747126074712607956486Pantoea vagans C9-1 chromosome, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1e-51201
NC_002940:1065246:108655310865531087035483Haemophilus ducreyi 35000HP, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1e-48191
NC_010468:1029471:105210410521041052583480Escherichia coli ATCC 8739, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6e-47186
NC_007984:221030:223856223856224332477Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase3e-46184
NC_016632:285408:298703298703299170468Serratia symbiotica str. 'Cinara cedri' chromosome, complete2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2e-45181
NC_012673:1600242:159977215997721600245474Exiguobacterium sp. AT1b, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase3e-45180
NC_010995:2547164:255755525575552558034480Cellvibrio japonicus Ueda107, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase7e-44176
NC_004578:1719849:172296117229611723434474Pseudomonas syringae pv. tomato str. DC3000, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6e-44176
NC_002570:126500:142151142151142624474Bacillus halodurans C-125, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1e-43175
NC_012751:1538500:155588415558841556369486Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase3e-42170
NC_010382:4479464:448873244887324489208477Lysinibacillus sphaericus C3-41, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase7e-42169
NC_008344:1364142:136536113653611365864504Nitrosomonas eutropha C91, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase5e-37153
NC_014393:187454:204870204870205337468Clostridium cellulovorans 743B chromosome, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase4e-36150
NC_008601:1151653:117192011719201172399480Francisella tularensis subsp. novicida U112, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase3e-36150
NC_016043:471719:493003493003493488486Taylorella asinigenitalis MCE3 chromosome, complete genome2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase3e-36150
NC_014109:27500:334653346533953489Candidatus Riesia pediculicola USDA chromosome, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2e-36150
NC_006138:273237:2770292770292783301302Desulfotalea psychrophila LSv54, complete genomesimilar to IspD/IspF bifunctional enzyme (Rhodobacter capsulatus)2e-36150
NC_015275:3243689:325067432506743251153480Clostridium lentocellum DSM 5427 chromosome, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6e-36149
NC_009633:4563877:460502846050284605507480Alkaliphilus metalliredigens QYMF chromosome, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2e-35148
NC_014624:3810163:383352138335213834003483Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein4e-35146
NC_019903:421000:435723435723436202480Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase2e-34144
NC_005085:1269787:132359813235981324074477Chromobacterium violaceum ATCC 12472, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2e-33140
NC_014632:1914500:193903819390381939517480Ilyobacter polytropus DSM 2926 chromosome, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase5e-33139
NC_011899:86800:111733111733112230498Halothermothrix orenii H 168, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2e-31134
NC_014378:131810:154001154001154483483Acetohalobium arabaticum DSM 5501 chromosome, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6e-31132
NC_007604:1183497:120383712038371204319483Synechococcus elongatus PCC 7942, complete genomeMECDP-synthase1e-29129
NC_006576:414696:416486416486416968483Synechococcus elongatus PCC 6301, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1e-29129
NC_005090:1812833:1835616183561618367551140Wolinella succinogenes DSM 1740, complete genomebifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein2e-29128
NC_015738:838715:860695860695861201507Eggerthella sp. YY7918, complete genomehypothetical protein4e-29126
NC_016776:4525065:454359445435944544073480Bacteroides fragilis 638R, complete genomeputative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase7e-29126
NC_006347:4562242:457746945774694577948480Bacteroides fragilis YCH46, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase7e-29126
NC_003228:4449072:446346544634654463944480Bacteroides fragilis NCTC 9343, complete genomeputative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2e-28124
NC_004344:589375:614360614360614833474Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein5e-28123
NC_013009:122000:122009122009122515507Neorickettsia risticii str. Illinois, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1e-27122
NC_006832:160222:160222160222160776555Ehrlichia ruminantium str. Welgevonden, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1e-27121
NC_012988:4387735:439113743911374391871735Methylobacterium extorquens DM4, complete genome2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase1e-27121
NC_016024:1974715:198998619899861990477492Candidatus Chloracidobacterium thermophilum B chromosome chromosome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase3e-27120
NC_006831:157895:157895157895158449555Ehrlichia ruminantium str. Gardel, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase7e-27119
NC_019970:336472:356748356748357230483Thermoanaerobacterium thermosaccharolyticum M0795, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6e-26116
NC_007519:1782067:1783902178390217851011200Desulfovibrio alaskensis G20 chromosome, complete genome2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1e-25115
NC_007356:51080:560695606956542474Dehalococcoides sp. CBDB1, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2e-24111
NC_013890:53538:556085560856081474Dehalococcoides sp. GT chromosome, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2e-24111
NC_009455:53000:554885548855961474Dehalococcoides sp. BAV1 chromosome, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1e-24111
NC_015682:205900:242018242018242494477Thermodesulfobacterium sp. OPB45 chromosome, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase4e-22103
NC_011297:1296968:130107113010711301568498Dictyoglomus thermophilum H-6-12, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase9e-22102
NC_015714:542679:5451615451615464081248Treponema paraluiscuniculi Cuniculi A chromosome, complete genomebifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2e-21101
NC_016633:1353458:135812913581291358611483Sphaerochaeta pleomorpha str. Grapes chromosome, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6e-2199.8
NC_000919:545141:5476725476725488711200Treponema pallidum subsp. pallidum str. Nichols, complete genomehypothetical protein6e-2199.8
NC_016842:546661:5491445491445503911248Treponema pallidum subsp. pertenue str. SamoaD chromosome, completebifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6e-2199.8
NC_016843:547149:5496325496325508791248Treponema pallidum subsp. pertenue str. Gauthier chromosome,bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6e-2199.8
NC_016848:547115:5495985495985508451248Treponema pallidum subsp. pertenue str. CDC2 chromosome, completebifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6e-2199.8
NC_010741:546573:5490565490565503031248Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein5e-2199.8
NC_016844:547069:5495525495525507991248Treponema pallidum subsp. pallidum DAL-1 chromosome, completebifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase5e-2199.8
NC_017268:546376:5488595488595501061248Treponema pallidum subsp. pallidum str. Chicago chromosome,bifunctional enzyme IspD/ispF5e-2199.8
NC_021508:546592:5490755490755503221248Treponema pallidum subsp. pallidum SS14, complete genomebifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase5e-2199.8
NC_016148:951446:9724609724609736141155Thermovirga lienii DSM 17291 chromosome, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1e-2099
NC_015064:1268223:126920712692071269821615Acidobacterium sp. MP5ACTX9 chromosome, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1e-2098.6
NC_005835:1345790:136145713614571361915459Thermus thermophilus HB27, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2e-1684.7
NC_015635:5222000:523816152381615238652492Microlunatus phosphovorus NM-1, complete genome2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2e-1581.6
NC_012785:1988527:200348820034882003958471Kosmotoga olearia TBF 19.5.1, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase9e-1269.3
NC_004432:1310322:134122713412271341724498Mycoplasma penetrans HF-2, complete genomeputative enzyme of deoxy-xylulose pathway YgbB1e-1168.6
NC_010003:1242846:125743212574321257920489Petrotoga mobilis SJ95, complete genome2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase3e-1064.3
NC_011295:779569:7849447849447860321089Coprothermobacter proteolyticus DSM 5265, complete genomebifunctional enzyme IspD/ispF8e-1062.8