Pre_GI: BLASTP Hits

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Query: NC_016445:2593800:2622398 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2622398, End: 2623066, Length: 669

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:168530:197140197140197808669Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-102372
NC_002505:168532:197130197130197798669Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-102372
NC_015410:2505168:251246825124682513082615Pseudomonas mendocina NK-01 chromosome, complete genomelysine exporter protein LysE/YggA7e-27120
NC_009092:1684467:168446716844671685117651Shewanella loihica PV-4, complete genomeLysine exporter protein (LYSE/YGGA)4e-22104
NC_010170:1417615:143407414340741434691618Bordetella petrii, complete genomeputative amino acid efflux transmembrane protein1e-1376.6
NC_018678:2382708:238495023849502385576627Alteromonas macleodii str. 'English Channel 673' chromosome,lysine exporter protein LysE/YggA4e-1374.7
NC_008577:613958:625299625299625910612Shewanella sp. ANA-3 chromosome 1, complete sequenceLysine exporter protein (LYSE/YGGA)1e-1170.1
NC_018750:3249756:326965532696553270272618Streptomyces venezuelae ATCC 10712, complete genomeL-lysine permease2e-1168.9
NC_015434:2527412:255327525532752553871597Verrucosispora maris AB-18-032 chromosome, complete genomelysine exporter protein LysE/YggA8e-1167.4
NC_009707:36024:414794147942081603Campylobacter jejuni subsp. doylei 269.97 chromosome, completethreonine efflux protein9e-1063.9
NC_018868:4174794:417564341756434176308666Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomelysine exporter protein LysE/YggA4e-0961.6
NC_016582:5769080:578622457862245786847624Streptomyces bingchenggensis BCW-1 chromosome, complete genomeLysine exporter protein LysE1e-0860.1
NC_006138:2630338:263066726306672631317651Desulfotalea psychrophila LSv54, complete genomehypothetical protein5e-0858.2
NC_007498:1072112:108687910868791087496618Pelobacter carbinolicus DSM 2380, complete genomeputative threonine efflux protein5e-0857.8
NC_017186:9120711:912610891261089126722615Amycolatopsis mediterranei S699 chromosome, complete genomelysine exporter protein LysE/YggA1e-0756.6
NC_014318:9120651:912604891260489126662615Amycolatopsis mediterranei U32 chromosome, complete genomelysine exporter protein LysE/YggA1e-0756.6
NC_013850:3303500:332030333203033320941639Klebsiella variicola At-22 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)4e-0754.7
NC_012660:2143376:218936921893692189986618Pseudomonas fluorescens SBW25 chromosome, complete genomeputative amino acid transporter-like protein2e-0652.8
NC_014915:3039639:304072030407203041346627Geobacillus sp. Y412MC52 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)5e-0651.2
NC_011725:2206000:222062922206292221261633Bacillus cereus B4264 chromosome, complete genomehomoserine/threonine efflux protein6e-0651.2
NC_016613:1805907:182610618261061826753648Vibrio sp. EJY3 chromosome 1, complete sequenceHomoserine/homoserine lactone efflux protein6e-0651.2
NC_015711:8169752:820575582057558206390636Myxococcus fulvus HW-1 chromosome, complete genomehomoserine/threonine efflux protein7e-0650.8
NC_020210:2969862:297081429708142971440627Geobacillus sp. GHH01, complete genomelysine exporter protein9e-0650.4