Pre_GI: BLASTP Hits

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Query: NC_016445:2593800:2616183 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2616183, End: 2617022, Length: 840

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:168530:190925190925191764840Vibrio cholerae IEC224 chromosome I, complete sequenceDNA processing protein5e-164576
NC_012668:442601:447232447232448071840Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein5e-164576
NC_002505:168532:190915190915191754840Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein5e-164576
NC_015633:338000:353596353596354435840Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein6e-144509
AC_000091:3976888:399418839941883995030843Escherichia coli W3110 DNA, complete genomepredicted DNA (exogenous) processing protein1e-103376
NC_000913:3624826:364340836434083644250843Escherichia coli K12, complete genomepredicted DNA (exogenous) processing protein1e-103376
NC_009800:3685651:368789636878963688738843Escherichia coli HS, complete genomeDNA utilization protein YhiR1e-103376
NC_010468:231000:247229247229248071843Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF5191e-103376
NC_010473:3722571:374115337411533741995843Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA (exogenous) processing protein1e-103376
NC_012759:3529657:353190235319023532744843Escherichia coli BW2952 chromosome, complete genomeputative DNA processing protein1e-103376
CP002516:246767:264366264366265208843Escherichia coli KO11, complete genomeprotein of unknown function DUF5193e-103374
NC_011751:4074586:409297740929774093819843Escherichia coli UMN026 chromosome, complete genomeputative DNA (exogenous) processing protein3e-103374
NC_011748:3983432:401019340101934011035843Escherichia coli 55989, complete genomeputative DNA (exogenous) processing protein3e-103374
NC_010498:3838419:385681038568103857652843Escherichia coli SMS-3-5, complete genomeDNA utilization protein YhiR3e-103374
NC_009801:3956917:395691739569173957759843Escherichia coli E24377A, complete genomeDNA utilization protein YhiR5e-103374
NC_013941:4249871:426828842682884269130843Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA utilization protein YhiR5e-103374
CU928160:3709081:370908137090813709923843Escherichia coli IAI1 chromosome, complete genomeputative DNA (exogenous) processing protein3e-103374
CU928145:3983432:401019340101934011035843Escherichia coli 55989 chromosome, complete genomeputative DNA (exogenous) processing protein3e-103374
CP002185:3822470:384086538408653841707843Escherichia coli W, complete genomepredicted DNA (exogenous) processing protein3e-103374
NC_007613:3470314:349034534903453491187843Shigella boydii Sb227, complete genomehypothetical protein3e-103374
NC_011741:3709081:370908137090813709923843Escherichia coli IAI1 chromosome, complete genomeputative DNA (exogenous) processing protein3e-103374
NC_012947:248000:264259264259265101843Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein3e-103374
NC_012967:3549880:357607535760753576917843Escherichia coli B str. REL606 chromosome, complete genomeputative DNA (exogenous) processing protein3e-103374
NC_016822:3923908:394361839436183944460843Shigella sonnei 53G, complete genomeputative DNA processing protein3e-103374
NC_016902:246767:264366264366265208843Escherichia coli KO11FL chromosome, complete genomehypothetical protein3e-103374
NC_011415:3887997:389024238902423891084843Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-102371
NC_014121:5000069:502482850248285025670843Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-102370
NC_004337:3590323:362107136210713621913843Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-101369
NC_004741:4132056:415193541519354152777843Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-101369
NC_017328:3655876:365587636558763656769894Shigella flexneri 2002017 chromosome, complete genomeDNA utilization protein YhiR1e-101369
NC_008258:3581583:358158335815833582476894Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-101369
NC_006905:3717306:372177737217773722619843Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein2e-100365
NC_013416:386301:404874404874405719846Aggregatibacter actinomycetemcomitans D11S-1, complete genomeOrfJ4e-93341
NC_016513:689689:708267708267709112846Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completetyrosine recombinase XerD4e-93341
NC_009092:4337617:434981643498164350655840Shewanella loihica PV-4, complete genomeprotein of unknown function DUF5191e-73276
NC_015424:748785:764847764847765701855Aeromonas veronii B565 chromosome, complete genomeprotein involved in external DNA uptake9e-71266
NC_008570:4009762:401413940141394014993855Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein involved in external DNA uptake1e-70266
NC_009348:3819271:382162938216293822483855Aeromonas salmonicida subsp. salmonicida A449, complete genomeprotein involved in catabolism of external DNA2e-70265
NC_016002:2946702:294759929475992948444846Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein4e-66251
NC_009439:608500:621578621578622426849Pseudomonas mendocina ymp, complete genomehypothetical protein3e-61235
NC_008783:507939:526474526474527340867Bartonella bacilliformis KC583, complete genomeyhiR family protein3e-59228
NC_010410:480518:484154484154485011858Acinetobacter baumannii AYE, complete genomehypothetical protein6e-51201
NC_010611:3413333:342882934288293429686858Acinetobacter baumannii ACICU, complete genomeProtein involved in catabolism of external DNA6e-51201
NC_006677:2042387:206315320631532063992840Gluconobacter oxydans 621H, complete genomehypothetical protein3e-50198
NC_009484:1627734:164673216467321647553822Acidiphilium cryptum JF-5 chromosome, complete genomehypothetical protein4e-45181
NC_015186:1698000:171699417169941717815822Acidiphilium multivorum AIU301, complete genomehypothetical protein4e-45181
NC_009049:2131017:213283921328392133621783Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceprotein of unknown function DUF5193e-39162
NC_015976:2900891:291906229190622919892831Sphingobium sp. SYK-6, complete genomehypothetical protein2e-38159