Pre_GI: BLASTP Hits

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Query: NC_016445:1363831:1413835 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 1413835, End: 1414101, Length: 267

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1978058:198874219887421989008267Vibrio cholerae IEC224 chromosome I, complete sequencephage protein9e-47185
NC_012668:1688500:170480717048071705073267Vibrio cholerae MJ-1236 chromosome 1, complete sequencephage protein9e-47185
NC_012582:2013515:202695620269562027222267Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein9e-47185
NC_012751:1988280:200366120036612004305645Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeMu-like prophage F protein2e-0754.7
NC_020301:853267:8712508712508724551206Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomehypothetical protein8e-0649.3