Pre_GI: BLASTP Hits

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Query: NC_015977:3424178:3479177 Roseburia hominis A2-183 chromosome, complete genome

Start: 3479177, End: 3479884, Length: 708

Host Lineage: Roseburia hominis; Roseburia; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Roseburia hominis is one of the most numerous Firmicutes in the human gut.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009922:42696:456394563946355717Alkaliphilus oremlandii OhILAs, complete genometwo component transcriptional regulator, LytTR family5e-26117
NC_009089:1283000:128229312822931283006714Clostridium difficile 630, complete genometwo-component response regulator6e-24110
NC_010520:1146000:116684911668491167565717Clostridium botulinum A3 str. Loch Maree, complete genomeLytTr DNA-binding domain family1e-21103
NC_016627:1485799:149181114918111492536726Clostridium clariflavum DSM 19732 chromosome, complete genomeresponse regulator of the LytR/AlgR family4e-21101
NC_008261:576923:593925593925594641717Clostridium perfringens ATCC 13124, complete genomeDNA-binding response regulator8e-2097.4
NC_015690:8614000:862677486267748627514741Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo-component response regulator8e-2097.1
NC_013174:501326:500595500595501329735Jonesia denitrificans DSM 20603, complete genometwo component transcriptional regulator, LytTR family5e-1994.7
NC_014624:3316916:332634833263483326935588Eubacterium limosum KIST612 chromosome, complete genomeLytTR family two component transcriptional regulator9e-1994
NC_016048:308342:328892328892329599708Oscillibacter valericigenes Sjm18-20, complete genomeputative two-component response regulator9e-1890.5
NC_015977:3424178:347591234759123476646735Roseburia hominis A2-183 chromosome, complete genometwo-component system response regulator protein3e-1788.6
NC_015172:850802:866232866232866960729Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometwo component transcriptional regulator, LytTR family8e-1787.4
NC_012778:207415:217309217309218022714Eubacterium eligens ATCC 27750, complete genometwo-component system, LytT family, response regulator1e-1687
NC_016048:375676:399488399488400183696Oscillibacter valericigenes Sjm18-20, complete genomeputative two-component response regulator2e-1685.9
NC_014363:1973670:198281319828131983520708Olsenella uli DSM 7084 chromosome, complete genometwo component transcriptional regulator, LytTR family5e-1684.7
NC_011898:3159411:319241031924103193168759Clostridium cellulolyticum H10, complete genometwo component transcriptional regulator, LytTR family7e-1684.3
NC_014152:2849991:286797228679722868697726Thermincola sp. JR, complete genometwo component transcriptional regulator, LytTR family6e-1684.3
NC_016894:77853:840308403084764735Acetobacterium woodii DSM 1030 chromosome, complete genometwo component transcriptional regulator8e-1684
NC_014624:287500:304428304428305174747Eubacterium limosum KIST612 chromosome, complete genomeResponse regulator of the LytR/AlgR family1e-1583.6
NC_006510:1501487:152070415207041521444741Geobacillus kaustophilus HTA426, complete genometranscriptional regulator1e-1480.5
NC_018704:2417902:242905824290582429768711Amphibacillus xylanus NBRC 15112, complete genomeputative two-component system response regulator1e-1480.1
NC_019968:1304450:131481713148171315533717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family2e-1479.3
NC_019968:1084288:112808911280891128805717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family2e-1479.3
NC_015589:2281054:228878522887852289513729Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeLytTr DNA-binding protein4e-1478.6
NC_014376:3796990:380806238080623808787726Clostridium saccharolyticum WM1 chromosome, complete genometwo component transcriptional regulator, LytTR family3e-1478.6
NC_014376:2921769:293831329383132939053741Clostridium saccharolyticum WM1 chromosome, complete genometwo component transcriptional regulator, LytTR family4e-1478.2
NC_007644:1638083:165823516582351658972738Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, LytR/AlgR family6e-1477.8
NC_007907:2879568:289297128929712893726756Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-1477
NC_011830:3904034:392032539203253921080756Desulfitobacterium hafniense DCB-2, complete genometwo component transcriptional regulator, LytTR family2e-1376.3
NC_007907:2249607:225088322508832251608726Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1375.5
NC_013316:2033906:207459320745932075183591Clostridium difficile R20291, complete genomehypothetical protein3e-1375.1
NC_020126:7686076:768779776877977688558762Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator9e-1373.9
NC_004663:1499145:151426015142601514958699Bacteroides thetaiotaomicron VPI-5482, complete genometwo-component system response regulator8e-1373.9
NC_014633:583858:604072604072604797726Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator5e-1271.6
NC_014393:1022843:104502710450271045773747Clostridium cellulovorans 743B chromosome, complete genometwo component transcriptional regulator, LytTR family6e-1270.9
NC_014616:54500:567695676957485717Bifidobacterium bifidum S17 chromosome, complete genometwo-component response regulator7e-1270.9
NC_014387:281157:282005282005282703699Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeLytTR/response regulator domain-containing protein9e-1270.5
NC_014376:1842290:186064418606441861369726Clostridium saccharolyticum WM1 chromosome, complete genometwo component transcriptional regulator, LytTR family9e-1270.5
NC_006347:2190000:219573921957392196437699Bacteroides fragilis YCH46, complete genometwo-component system response regulator1e-1170.1
NC_003228:2245181:225199322519932252691699Bacteroides fragilis NCTC 9343, complete genomeputative two-component system response regulator1e-1170.1
NC_016776:2237404:224442922444292245127699Bacteroides fragilis 638R, complete genomeputative two-component system response regulator1e-1170.1
NC_015726:3452232:345363334536333454394762Cupriavidus necator N-1 chromosome 1, complete sequenceLytR family transcriptional regulator2e-1169.7
NC_015275:3407358:342575034257503426475726Clostridium lentocellum DSM 5427 chromosome, complete genometwo component transcriptional regulator, LytTR family2e-1169.3
NC_015510:1234500:125002412500241250725702Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator4e-1168.2
NC_009828:600349:601856601856602527672Thermotoga lettingae TMO, complete genometwo component transcriptional regulator, LytTR family6e-1167.8
NC_009785:387910:407897407897408631735Streptococcus gordonii str. Challis substr. CH1, complete genomeResponse regulator of the LytR/AlgR family7e-1167.4
NC_016940:470163:502234502234502953720Saprospira grandis str. Lewin chromosome, complete genometwo component transcriptional regulator, LytTR family protein1e-1067
NC_008536:1778500:179196917919691792745777Solibacter usitatus Ellin6076, complete genomeresponse regulator receiver protein2e-1065.9
NC_016751:1700164:172001917200191720765747Marinitoga piezophila KA3 chromosome, complete genomeresponse regulator of the LytR/AlgR family3e-1065.5
NC_009615:2311352:231296223129622313666705Parabacteroides distasonis ATCC 8503 chromosome, complete genometwo-component system response regulator6e-1064.3
NC_015167:313506:335892335892336584693Cellulophaga lytica DSM 7489 chromosome, complete genomeLytTR family two component transcriptional regulator6e-1064.3
NC_014032:338547:361332361332362084753Salinibacter ruber M8 chromosome, complete genomesensory transduction protein lytT7e-1064.3
NC_013061:1856969:187473818747381875517780Pedobacter heparinus DSM 2366, complete genomeLytTr DNA-binding region7e-1064.3
NC_010718:2265447:226544722654472266163717Natranaerobius thermophilus JW/NM-WN-LF, complete genometwo component transcriptional regulator, LytTR family7e-1064.3
NC_015311:403281:438961438961439716756Prevotella denticola F0289 chromosome, complete genomeLytTr DNA-binding domain-containing protein1e-0963.5
NC_010658:2529033:255507825550782555812735Shigella boydii CDC 3083-94, complete genomeresponse regulator2e-0963.2
NC_008258:2473000:249696424969642497698735Shigella flexneri 5 str. 8401, complete genomeputative 2-component transcriptional regulator2e-0963.2
NC_004337:2478461:250322425032242503958735Shigella flexneri 2a str. 301, complete genomeputative 2-component transcriptional regulator2e-0963.2
CP002516:1419413:142028314202831421017735Escherichia coli KO11, complete genometwo component transcriptional regulator, LytTR family2e-0963.2
NC_013941:2928000:296958729695872970321735Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-0963.2
NC_016822:2678691:270562327056232706357735Shigella sonnei 53G, complete genomeLytTR family two component transcriptional regulator2e-0963.2
NC_016902:1419413:142028314202831421017735Escherichia coli KO11FL chromosome, complete genomeLytTR family two component transcriptional regulator2e-0963.2
NC_015510:6653159:666073866607386661478741Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator1e-0963.2
NC_017316:2581781:259771425977142598442729Enterococcus faecalis OG1RF chromosome, complete genomeresponse regulator2e-0962.8
NC_014934:11341:366453664537337693Cellulophaga algicola DSM 14237 chromosome, complete genometwo component transcriptional regulator, lyttr family2e-0962.8
NC_015703:2693463:270975827097582710495738Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator3e-0962.4
NC_009495:3502000:352046735204673521231765Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding response regulator, LytTr family3e-0962.4
NC_009697:3463736:349645534964553497219765Clostridium botulinum A str. ATCC 19397 chromosome, completeLytTr family DNA-binding response regulator3e-0962.4
NC_004668:3053119:306801830680183068746729Enterococcus faecalis V583, complete genomeresponse regulator2e-0962.4
NC_015687:1811573:181561018156101816371762Clostridium acetobutylicum DSM 1731 chromosome, complete genomeresponse regulator2e-0962.4
NC_003030:1811820:181401018140101814771762Clostridium acetobutylicum ATCC 824, complete genomeResponse regulator (CheY-like receiver domain and DNA-binding HTH domain)2e-0962.4
NC_017295:1809386:181342318134231814184762Clostridium acetobutylicum EA 2018 chromosome, complete genomeResponse regulator (CheY-like receiver domain and DNA-binding HTH domain)2e-0962.4
NC_010520:3580000:359767035976703598434765Clostridium botulinum A3 str. Loch Maree, complete genomeDNA-binding response regulator, LytTr family3e-0962
NC_018868:2615822:263686726368672637601735Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomealginate biosynthesis regulatory protein AlgR4e-0962
NC_017297:3594000:361271236127123613476765Clostridium botulinum F str. 230613 chromosome, complete genomeDNA-binding response regulator, LytTr family4e-0962
NC_009699:3581376:361409836140983614862765Clostridium botulinum F str. Langeland chromosome, complete genomeLytTr family DNA-binding response regulator4e-0962
NC_006347:3843228:384459438445943845331738Bacteroides fragilis YCH46, complete genometwo-component system response regulator5e-0961.6
NC_016776:3798108:379737437973743798111738Bacteroides fragilis 638R, complete genomeputative two-component system, response regulator5e-0961.6
NC_003228:3752035:375130137513013752038738Bacteroides fragilis NCTC 9343, complete genomeputative two-component system, response regulator4e-0961.6
NC_012563:3729817:376253737625373763301765Clostridium botulinum A2 str. Kyoto, complete genomeDNA-binding response regulator, LytTr family4e-0961.6
NC_007333:3360000:336380033638003364594795Thermobifida fusca YX, complete genomeresponse regulator receiver6e-0961.2
NC_009617:648000:666775666775667533759Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeLytTR family two component transcriptional regulator7e-0960.8
NC_014219:999648:1007214100721410083561143Bacillus selenitireducens MLS10 chromosome, complete genomeresponse regulator receiver and SARP domain protein7e-0960.8
NC_015589:3852217:386341738634173864118702Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeresponse regulator receiver8e-0960.8
NC_018721:2872780:287278028727802873505726Psychroflexus torquis ATCC 700755 chromosome, complete genometwo-component system response regulator, LytR/AlgR family8e-0960.8
NC_012778:1946924:197010019701001970786687Eubacterium eligens ATCC 27750, complete genometwo-component system, LytT family, response regulator LytT1e-0860.5
NC_018515:1406816:141371214137121414566855Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeresponse regulator containing CheY-like receiver and SARP domains9e-0960.5
NC_008687:133728:1337281337281350531326Paracoccus denitrificans PD1222 chromosome 2, complete sequencetwo component, sigma54 specific, transcriptional regulator, Fis family9e-0960.5
NC_013222:2795919:281526028152602815907648Robiginitalea biformata HTCC2501, complete genometwo-component system response regulator protein1e-0859.7
NC_016641:2773757:2773757277375727753491593Paenibacillus terrae HPL-003 chromosome, complete genomeAraC family transcriptional regulator2e-0859.3
NC_009616:99647:116610116610117290681Thermosipho melanesiensis BI429 chromosome, complete genomeLytTR family two component transcriptional regulator2e-0859.3
NC_015703:4483500:449416244941624494887726Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator3e-0858.9
NC_017025:1735835:174216717421671742898732Flavobacterium indicum GPTSA100-9, complete genomeTwo-component system response regulatory protein, LytTR family9e-0857.4
NC_014933:3715467:371826637182663718967702Bacteroides helcogenes P 36-108 chromosome, complete genometwo component transcriptional regulator, LytTR family9e-0857.4
NC_012778:841934:882083882083882793711Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-0757
NC_012918:2277500:2300001230000123013741374Geobacter sp. M21 chromosome, complete genomeFis family transcriptional regulator1e-0757
NC_014393:1421122:1427612142761214287121101Clostridium cellulovorans 743B chromosome, complete genomeresponse regulator receiver and SARP domain-containing protein1e-0757
NC_014614:608946:611958611958612692735Clostridium sticklandii, complete genomehypothetical protein1e-0756.6
NC_015856:3536441:356048135604813561233753Collimonas fungivorans Ter331 chromosome, complete genomeputative two-component response regulator transcription protein1e-0756.6
NC_015690:1726000:1733764173376417353621599Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYesN42e-0756.2
NC_016935:2256000:2263967226396722655561590Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-0756.2
NC_015510:1234500:125508212550821255795714Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator3e-0755.8
NC_013194:1040197:105397910539791054695717Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetwo component transcriptional regulator, LytTR family3e-0755.5
NC_020126:8984500:898947889894788990179702Myxococcus stipitatus DSM 14675, complete genometwo component transcriptional regulator, LytTR family protein3e-0755.5
NC_013216:2078444:210624221062422106607366Desulfotomaculum acetoxidans DSM 771, complete genomeresponse regulator receiver protein5e-0755.1
NC_015703:4483500:449270544927054493430726Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator4e-0755.1
NC_016791:3807740:3806658380665838077521095Clostridium sp. BNL1100 chromosome, complete genomeresponse regulator containing CheY-like receiver and SARP domains5e-0754.7
NC_015572:2262374:2273735227373522755281794Methylomonas methanica MC09 chromosome, complete genomeputative PAS/PAC sensor protein6e-0754.7
NC_009792:642881:644563644563645282720Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-0754.3
NC_014828:943911:9567489567489578541107Ethanoligenens harbinense YUAN-3 chromosome, complete genomeresponse regulator receiver and SARP domain protein7e-0754.3
NC_012108:1324885:1338915133891513403061392Desulfobacterium autotrophicum HRM2, complete genomeputative response regulator protein1e-0653.5
NC_002695:2893951:289323528932352893954720Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-0652.8
NC_013008:2889743:288902728890272889746720Escherichia coli O157:H7 str. TW14359 chromosome, complete genometwo-component response-regulatory protein YehT2e-0652.8
NC_011750:919953:938353938353939072720Escherichia coli IAI39 chromosome, complete genomeputative two-component response-regulatory protein YehT2e-0652.8
NC_005090:1033746:103714910371491037544396Wolinella succinogenes DSM 1740, complete genomePUTATIVE TWO-COMPONENT RESPONSE REGULATOR2e-0652.8
NC_013730:1074393:108006810800681080817750Spirosoma linguale DSM 74, complete genometwo component transcriptional regulator, LytTR family2e-0652.4
NC_016935:4117485:4164193416419341657701578Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator3e-0652
NC_015690:4361000:4398096439809643996731578Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator3e-0652
NC_009778:1070000:108629010862901087015726Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-0652
NC_014355:2210884:2225827222582722272421416Candidatus Nitrospira defluvii, complete genomesigma-54 dependent response regulator FleQ5e-0651.6
NC_009850:445000:455185455185455592408Arcobacter butzleri RM4018, complete genometwo-component response regulator5e-0651.6
NC_007575:973559:975967975967976665699Sulfurimonas denitrificans DSM 1251, complete genomeLytR/AlgR family transcriptional regulator4e-0651.6
NC_009615:2902871:292380429238042924535732Parabacteroides distasonis ATCC 8503 chromosome, complete genometwo-component response regulator4e-0651.6
NC_020272:3187482:3201383320138332024591077Bacillus amyloliquefaciens IT-45, complete genomeresponse regulator MprA5e-0651.2
NC_014219:999648:99964899964810007811134Bacillus selenitireducens MLS10 chromosome, complete genomeresponse regulator receiver and SARP domain protein6e-0651.2
NC_013406:347995:347995347995348765771Paenibacillus sp. Y412MC10 chromosome, complete genomeresponse regulator receiver and SARP domain-containing protein8e-0650.8
NC_020260:1111130:112837811283781129103726Cronobacter sakazakii Sp291, complete genometwo-component response-regulatory protein YehT9e-0650.4