Pre_GI: BLASTP Hits

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Query: NC_015975:441580:462657 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

Start: 462657, End: 463235, Length: 579

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016048:351205:358476358476358985510Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein5e-51200
NC_015589:2878000:287984128798412880455615Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0961.2
NC_014833:3161257:316420531642053164792588Ruminococcus albus 7 chromosome, complete genomehelix-turn-helix domain-containing protein6e-0960.8
NC_007907:4956500:496382249638224964049228Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-0960.5
NC_016048:2167440:217717721771772177911735Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein6e-0960.5
NC_011830:1037520:105910110591011059934834Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, XRE family7e-0960.5
NC_011830:3081726:309011130901113091079969Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, XRE family1e-0859.7
NC_007907:1996194:200522520052252006193969Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0859.7
NC_014479:509919:530075530075530860786Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehelix-turn-helix domain-containing protein2e-0859.3
NC_009328:293000:362637362637363419783Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein2e-0859.3
NC_015738:629297:632870632870633292423Eggerthella sp. YY7918, complete genomehypothetical protein1e-0859.3
NC_015759:726612:730036730036730575540Weissella koreensis KACC 15510 chromosome, complete genomeXRE family transcriptional regulator2e-0858.9
NC_010520:725312:730360730360730752393Clostridium botulinum A3 str. Loch Maree, complete genomeDNA-binding protein6e-0857.4
NC_013721:533048:557357557357558343987Gardnerella vaginalis 409-05, complete genomeDNA-binding protein6e-0857.4
NC_020210:3246839:326198032619803262387408Geobacillus sp. GHH01, complete genometranscriptional regulator6e-0857.4
NC_010001:69000:909309093091751822Clostridium phytofermentans ISDg, complete genometranscriptional regulator, XRE family1e-0756.2
NC_015977:2966971:298258929825892983200612Roseburia hominis A2-183 chromosome, complete genomehypothetical protein3e-0755.1
NC_015977:3011177:302804130280413028793753Roseburia hominis A2-183 chromosome, complete genomehypothetical protein4e-0754.7
NC_009495:2479465:252016025201602520594435Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding phage protein4e-0754.7
NC_016048:797762:8317148317148327841071Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein5e-0754.3
NC_017188:2221705:224299122429912243377387Bacillus amyloliquefaciens TA208 chromosome, complete genomeDNA-binding protein6e-0753.9
NC_014915:3320768:335612833561283356535408Geobacillus sp. Y412MC52 chromosome, complete genomehelix-turn-helix domain protein8e-0753.5
NC_013411:3314799:335015933501593350566408Geobacillus sp. Y412MC61, complete genometranscriptional regulator, XRE family8e-0753.5
NC_020272:2748733:279546227954622795836375Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein8e-0753.5
NC_019842:1172944:117596611759661176340375Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein8e-0753.5
NC_014206:3355156:337460433746043375011408Geobacillus sp. C56-T3 chromosome, complete genomeXRE family transcriptional regulator7e-0753.5
NC_017068:1327025:134093213409321341534603Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative Xre family transcriptional regulator1e-0653.1
NC_015573:2463123:248983824898382490296459Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0653.1
NC_012891:1277966:129143912914391292212774Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein1e-0652.8
NC_014011:1139818:116064211606421161322681Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator, XRE family1e-0652.8
NC_013895:117429:164188164188164820633Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeDNA-binding protein1e-0652.8
NC_015500:2112975:211297521129752113562588Treponema brennaborense DSM 12168 chromosome, complete genomehelix-turn-helix domain protein1e-0652.8
NC_014644:1275038:127837012783701279002633Gardnerella vaginalis ATCC 14019 chromosome, complete genomeXRE family transcriptional regulator2e-0652
NC_014831:8965:177711777118166396Thermaerobacter marianensis DSM 12885 chromosome, complete genomehelix-turn-helix domain protein2e-0652
NC_013721:533048:555423555423556055633Gardnerella vaginalis 409-05, complete genomeDNA-binding protein3e-0651.6
NC_015428:1483768:150354015035401503917378Lactobacillus buchneri NRRL B-30929 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0651.6
NC_009454:713892:7279337279337290001068Pelotomaculum thermopropionicum SI, complete genomehypothetical protein3e-0651.6
NC_015732:982774:9996799996791000284606Spirochaeta caldaria DSM 7334 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0650.8
NC_009012:1857845:1863582186358218647061125Clostridium thermocellum ATCC 27405, complete genometranscriptional regulator, XRE family6e-0650.8