Pre_GI: BLASTP Hits

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Query: NC_015975:1056731:1070620 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

Start: 1070620, End: 1072932, Length: 2313

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013216:921377:9279929279929302262235Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated helicase Cas31e-121437
NC_014150:1423758:1423758142375814260522295Brachyspira murdochii DSM 12563 chromosome, complete genomeCRISPR-associated helicase Cas39e-99361
NC_014206:1467000:1474954147495414771312178Geobacillus sp. C56-T3 chromosome, complete genomeCRISPR-associated helicase Cas37e-97355
NC_017096:260333:2653822653822676282247Caldisericum exile AZM16c01, complete genomeputative CRISPR-associated protein1e-91338
NC_020134:1783000:1791244179124417935892346Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD2e-88327
NC_020134:2067476:2074883207488320770962214Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated helicase Cas34e-86320
NC_012440:1249941:1259969125996912622182250Persephonella marina EX-H1, complete genomecrispr-associated helicase Cas32e-83310
NC_000918:246792:2467922467922489812190Aquifex aeolicus VF5, complete genomehypothetical protein2e-76287
NC_020411:583503:5965795965795988702292Hydrogenobaculum sp. HO, complete genomeCRISPR-associated helicase Cas31e-69264
NC_015587:583530:5966065966065988972292Hydrogenobaculum sp. SHO chromosome, complete genomeCRISPR-associated helicase Cas31e-69264
NC_015557:583475:5965515965515988422292Hydrogenobaculum sp. 3684 chromosome, complete genomeCRISPR-associated helicase Cas31e-69264
NC_013894:1:1428214282159881707Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated helicase Cas32e-66254
NC_009486:1103915:1112028111202811143192292Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated helicase Cas32e-53211
NC_016051:460624:4687704687704713762607Thermococcus sp. AM4 chromosome, complete genomeCRISPR-associated helicase Cas31e-44182
NC_000916:983500:1001172100117210036642493Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein4e-40166
NC_010803:483713:4952324952324974842253Chlorobium limicola DSM 245, complete genomeCRISPR-associated helicase Cas31e-38162
NC_010424:1356000:1362881136288113652682388Candidatus Desulforudis audaxviator MP104C, complete genomeCRISPR-associated helicase Cas35e-36153
NC_000961:135493:1538931538931559652073Pyrococcus horikoshii OT3, complete genomehypothetical protein3e-35150
NC_009973:77518:9643396433988472415Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeCRISPR-associated helicase Cas32e-32141
NC_015680:1275252:1275252127525212773302079Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas3 domain-containing protein1e-31139
NC_015680:841783:8449328449328471092178Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas31e-30135
NC_011978:699500:7103537103537115461194Thermotoga neapolitana DSM 4359, complete genomeCRISPR-associated helicase, Cas3 family4e-30134
NC_013510:1023348:1039357103935710424403084Thermomonospora curvata DSM 43183, complete genomemetal dependent phosphohydrolase8e-28126
NC_015966:1316901:1323321132332113254982178Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomemetal dependent phosphohydrolase1e-27125
NC_019942:1370872:1377646137764613798472202Aciduliprofundum sp. MAR08-339, complete genomeDEAD/DEAH box helicase1e-26122
NC_015737:2146953:2151963215196321547312769Clostridium sp. SY8519, complete genomeputative helicase2e-21104
NC_019978:922978:9399719399719423132343Halobacteroides halobius DSM 5150, complete genomeCRISPR-associated helicase Cas33e-21104
NC_009921:1668306:1682199168219916846342436Frankia sp. EAN1pec, complete genomeCRISPR-associated helicase Cas35e-21103
NC_013501:1881692:1900060190006019024352376Rhodothermus marinus DSM 4252, complete genomeCRISPR-associated helicase Cas32e-20101
NC_010610:795975:8050038050038077262724Lactobacillus fermentum IFO 3956, complete genomehypothetical protein3e-20100
NC_013851:759500:7688657688657714982634Allochromatium vinosum DSM 180 chromosome, complete genomeCRISPR-associated helicase Cas34e-20100
NC_002939:1505701:1512324151232415149752652Geobacter sulfurreducens PCA, complete genomeCRISPR-associated helicase Cas37e-2099.8
NC_015573:2975000:2983739298373929862492511Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeCRISPR-associated helicase Cas37e-2099.8
NC_015951:107360:1140161140161167872772Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeCRISPR-associated helicase Cas31e-1999
NC_002935:2292835:2302097230209723047272631Corynebacterium diphtheriae NCTC 13129, complete genomePutative helicase4e-1997.4
NC_013524:1150725:1150725115072511535352811Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeCRISPR-associated helicase Cas34e-1997.1
NC_008278:514600:5190645190645218652802Frankia alni ACN14a, complete genomehypothetical protein; putative DEAD/DEAH box helicase domain9e-1996.3
NC_013849:1595924:1614550161455016161781629Ferroglobus placidus DSM 10642 chromosome, complete genomeCRISPR-associated helicase Cas38e-1996.3
NC_015571:290355:3024493024493047522304Porphyromonas gingivalis TDC60, complete genomeCRISPR-associated helicase Cas31e-1895.9
NC_008529:735233:7468327468327495972766Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated helicase1e-1895.5
NC_014727:798191:8099868099868127512766Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated helicase cas32e-1895.1
NC_008526:343445:3475193475193502872769Lactobacillus casei ATCC 334, complete genomeCRISPR-associated helicase2e-1894.7
NC_008054:745704:7546887546887574532766Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeCRISPR-associated helicase Cas32e-1894.7
NC_016786:2235731:2246368224636822489982631Corynebacterium diphtheriae HC01 chromosome, complete genomeCRISPR-associated protein3e-1894.7
NC_016782:2235000:2245769224576922483992631Corynebacterium diphtheriae 241 chromosome, complete genomeCRISPR-associated protein3e-1894.7
NC_013159:1422370:1428340142834014308382499Saccharomonospora viridis DSM 43017, complete genomeCRISPR-associated helicase Cas39e-1892.8
NC_006361:4574536:4590706459070645934502745Nocardia farcinica IFM 10152, complete genomehypothetical protein8e-1892.8
NC_002950:2098454:2106124210612421084602337Porphyromonas gingivalis W83, complete genomeCRISPR-associated helicase Cas32e-1792
NC_015388:89000:99529995291013341806Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeCRISPR-associated helicase Cas33e-1790.9
NC_012590:977920:9836789836789864882811Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein5e-1790.5
NC_011978:699500:7092067092067103661161Thermotoga neapolitana DSM 4359, complete genomeCRISPR-associated helicase, Cas3 family1e-1689
NC_015435:1010973:1034037103403710355331497Metallosphaera cuprina Ar-4 chromosome, complete genomeCRISPR-associated helicase Cas3 family protein1e-1689
NC_004342:3164500:3167477316747731697352259Leptospira interrogans serovar Lai str. 56601 chromosome I,ATP-dependent RNA helicase2e-1688.2
NC_005823:1105524:1130506113050611327582253Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130ATP-dependent RNA helicase2e-1688.2
NC_012560:1677798:1699773169977317024782706Azotobacter vinelandii DJ, complete genomeCRISPR-associated helicase Cas3, core2e-1688.2
NC_021150:1677811:1699786169978617024912706Azotobacter vinelandii CA6, complete genomeCRISPR-associated helicase Cas3, core2e-1688.2
NC_007164:775000:7834007834007862522853Corynebacterium jeikeium K411, complete genomehypothetical protein3e-1687.8
NC_010468:1029471:1036180103618010388462667Escherichia coli ATCC 8739, complete genomeCRISPR-associated helicase Cas33e-1687.8
NC_013510:3117837:3128254312825431311512898Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated helicase Cas34e-1687.4
NC_012759:2757826:2768387276838727710532667Escherichia coli BW2952 chromosome, complete genomehypothetical protein4e-1687.4
AC_000091:2872000:2883209288320928858752667Escherichia coli W3110 DNA, complete genomeconserved hypothetical protein, member of DEAD box family4e-1687.4
NC_000913:2873443:2882575288257528852412667Escherichia coli K12, complete genomeconserved protein, member of DEAD box family4e-1687.4
NC_010473:2963951:2975117297511729777832667Escherichia coli str. K-12 substr. DH10B, complete genomeconserved protein, member of DEAD box family4e-1687.4
NC_016610:2489415:2495937249593724980212085Tannerella forsythia ATCC 43037 chromosome, complete genomeCRISPR-associated helicase Cas36e-1686.7
NC_008609:2518993:2531914253191425345532640Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated helicase Cas39e-1686.3
NC_009800:2889928:2901786290178629044522667Escherichia coli HS, complete genomeCRISPR-associated helicase Cas32e-1585.5
NC_015676:1663700:1675169167516916779222754Methanosalsum zhilinae DSM 4017 chromosome, complete genomeCRISPR-associated helicase Cas32e-1585.1
NC_010003:2056000:2075621207562120778132193Petrotoga mobilis SJ95, complete genomeCRISPR-associated helicase Cas32e-1585.1
NC_007775:723925:7396277396277423082682Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated helicase Cas33e-1584.3
NC_002932:1851070:1868933186893318715182586Chlorobium tepidum TLS, complete genomehypothetical protein3e-1584.3
NC_015416:2838020:2843201284320128456032403Methanosaeta concilii GP-6 chromosome, complete genomeCRISPR-associated helicase Cas38e-1583.2
NC_000854:770000:7787457787457804571713Aeropyrum pernix K1, complete genomeCRISPR-associated helicase Cas31e-1482.8
NC_013131:4422000:4432703443270344373254623Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein, Cse1 family1e-1482.8
NC_017186:6395435:6449931644993164522102280Amycolatopsis mediterranei S699 chromosome, complete genomeCRISPR-associated helicase Cas32e-1481.6
NC_014318:6395392:6449887644988764521662280Amycolatopsis mediterranei U32 chromosome, complete genomeCRISPR-associated helicase Cas32e-1481.6
NC_015865:685882:6936206936206959262307Thermococcus sp. 4557 chromosome, complete genomeCRISPR-associated helicase Cas3-like protein3e-1480.9
NC_015680:841783:8522428522428538221581Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas35e-1480.1
NC_007333:1743890:1835906183590618387402835Thermobifida fusca YX, complete genomecRISPR-associated helicase Cas3, core8e-1479.7
NC_000917:40111:6883068830711092280Archaeoglobus fulgidus DSM 4304, complete genomeATP-dependent RNA helicase, putative1e-1379.3
NC_015387:942974:9498269498269526002775Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated helicase Cas31e-1379
NC_007333:1743890:1844722184472218476342913Thermobifida fusca YX, complete genomeCRISPR-associated helicase Cas3, core2e-1378.6
NC_018720:1812000:1820832182083218239993168Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated helicase Cas32e-1378.6
NC_016109:603829:6205116205116233722862Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated helicase3e-1377.8
NC_015436:1287873:1293817129381712964352619Spirochaeta coccoides DSM 17374 chromosome, complete genomeCRISPR-associated helicase Cas34e-1377.4
NC_012438:776260:7906217906217929092289Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeCRISPR-associated helicase Cas35e-1377
NC_020126:10091703:1010406510104065101063772313Myxococcus stipitatus DSM 14675, complete genomeATP-dependent RNA helicase7e-1376.6
NC_015389:481282:4862164862164893563141Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated helicase Cas31e-1275.9
NC_008095:8837612:8867872886787288701122241Myxococcus xanthus DK 1622, complete genomeCRISPR-associated helicase Cas31e-1275.5
NC_017276:735678:7456097456097471141506Sulfolobus islandicus REY15A chromosome, complete genomeCRISPR-associated helicase Cas32e-1275.1
NC_011296:1039749:1058944105894410605751632Thermodesulfovibrio yellowstonii DSM 11347, complete genomeCRISPR-associated helicase Cas34e-1274.3
NC_017275:342000:3508063508063523111506Sulfolobus islandicus HVE10/4 chromosome, complete genomeCRISPR-associated helicase Cas31e-1172.4
NC_013769:800000:8077438077438092661524Sulfolobus islandicus L.D.8.5 chromosome, complete genomeCRISPR-associated helicase Cas32e-1171.2
NC_012588:857500:8650148650148665191506Sulfolobus islandicus M.14.25 chromosome, complete genomeCRISPR-associated helicase Cas33e-1171.2
NC_012632:943104:9537599537599552641506Sulfolobus islandicus M.16.27 chromosome, complete genomeCRISPR-associated helicase Cas35e-1170.5
NC_013890:1175931:1184632118463211873102679Dehalococcoides sp. GT chromosome, complete genomeCRISPR-associated helicase Cas36e-1170.1
NC_012589:633500:6413616413616428661506Sulfolobus islandicus L.S.2.15, complete genomeCRISPR-associated helicase Cas36e-1170.1
NC_010610:1385066:1400770140077014032082439Lactobacillus fermentum IFO 3956, complete genomehypothetical protein6e-1170.1
NC_012726:850451:8684538684538699581506Sulfolobus islandicus M.16.4 chromosome, complete genomeCRISPR-associated helicase Cas36e-1170.1
NC_007356:1165760:1208782120878212114752694Dehalococcoides sp. CBDB1, complete genomeputative CRISPR-associated helicase Cas36e-1170.1
NC_009615:1354122:1372739137273913749642226Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase1e-1069.3
NC_012108:616088:6267306267306289912262Desulfobacterium autotrophicum HRM2, complete genomeputative CRISPR-associated helicase Cas3 (ATP-dependent DNA helicase)1e-1069.3
NC_010546:1175979:1195697119569711981022406Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein1e-1069.3
NC_014484:447889:4532194532194555282310Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein4e-1067.4
NC_019968:8397:1357413574157692196Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD4e-1067.4
NC_016906:3980122:3990842399084239932322391Gordonia polyisoprenivorans VH2 chromosome, complete genomeCRISPR-associated helicase Cas34e-1067.4
NC_019673:1988853:2042190204219020449372748Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated helicase Cas35e-1067
NC_002754:1811500:1817612181761218191591548Sulfolobus solfataricus P2, complete genomeATP-dependent RNA helicase homolog6e-1067
NC_012623:1874348:1881727188172718832321506Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeCRISPR-associated helicase Cas37e-1066.6
NC_012622:681472:7119947119947134991506Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeCRISPR-associated helicase Cas37e-1066.6
NC_009715:873280:8808488808488830222175Campylobacter curvus 525.92 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein8e-1066.2
NC_015589:3053504:3063199306319930655742376Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCRISPR-associated HD domain-containing protein1e-0966.2
NC_015660:3467579:3467579346757934700622484Geobacillus thermoglucosidasius C56-YS93 chromosome, completeCRISPR-associated HD domain-containing protein1e-0966.2
NC_015387:261799:2664582664582685932136Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemetal dependent phosphohydrolase1e-0965.9
NC_002754:1269463:1292310129231012938571548Sulfolobus solfataricus P2, complete genomeATP-dependent RNA helicase homolog2e-0964.7
NC_006177:324363:3470963470963492552160Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein3e-0964.7
NC_014209:2204515:2217893221789322202472355Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated helicase Cas33e-0964.3
NC_009954:1595743:1607846160784616095941749Caldivirga maquilingensis IC-167, complete genomeCRISPR-associated helicase Cas37e-0963.2
NC_013223:1848689:1869714186971418720562343Desulfohalobium retbaense DSM 5692, complete genomeCRISPR-associated helicase Cas31e-0862.8
NC_008148:258292:2745562745562770212466Rubrobacter xylanophilus DSM 9941, complete genomeCRISPR-associated helicase Cas3, core2e-0862
NC_012632:884811:9003919003919020371647Sulfolobus islandicus M.16.27 chromosome, complete genomeCRISPR-associated helicase Cas32e-0862
NC_012588:800942:8150738150738167191647Sulfolobus islandicus M.14.25 chromosome, complete genomeCRISPR-associated helicase Cas32e-0862
NC_000917:1666836:1685466168546616871061641Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein3e-0861.2
NC_011899:1603500:1626098162609816285662469Halothermothrix orenii H 168, complete genomeCRISPR-associated helicase Cas34e-0860.8
NC_019673:2051363:2085060208506020872942235Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated helicase Cas3 family protein protein4e-0860.8
NC_016630:28410:3300133001355892589Filifactor alocis ATCC 35896 chromosome, complete genomeATP-dependent RNA helicase4e-0860.8
NC_017218:1655009:1666981166698116694192439Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeCRISPR-associated helicase Cas33e-0860.8
NC_014961:969500:9790069790069807781773Desulfurococcus mucosus DSM 2162 chromosome, complete genomeCRISPR-associated helicase Cas37e-0860.1
NC_007947:621213:6246826246826269192238Methylobacillus flagellatus KT, complete genomemetal dependent phosphohydrolase7e-0860.1
NC_004757:905417:9093379093379113792043Nitrosomonas europaea ATCC 19718, complete genomeDEAD/DEAH box helicase:HD domain9e-0859.7
NC_014364:1116439:1120569112056911227942226Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated helicase Cas38e-0859.7
NC_017954:934616:9445079445079463391833Thermogladius cellulolyticus 1633 chromosome, complete genomehelicase3e-0757.8
NC_015634:2492771:2505441250544125079872547Bacillus coagulans 2-6 chromosome, complete genomeCRISPR-associated endonuclease Cas3e-0757.8
NC_007681:482445:4859174859174883042388Methanosphaera stadtmanae DSM 3091, complete genomepredicted helicase3e-0757.8
NC_014935:1047411:1058060105806010602372178Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecrispr-associated helicase, cas3 family5e-0757.4
NC_015416:2723189:2751286275128627537542469Methanosaeta concilii GP-6 chromosome, complete genomecrispr-associated helicase Cas34e-0757.4
NC_015518:1569936:1579373157937315808301458Acidianus hospitalis W1 chromosome, complete genomeCRISPR-associated helicase Cas34e-0757.4
NC_013204:2305140:2318079231807923202772199Eggerthella lenta DSM 2243, complete genomemetal dependent phosphohydrolase5e-0757
NC_014915:332784:3446143446143469442331Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated HD domain protein1e-0655.8
NC_013714:1830959:1842567184256718451102544Bifidobacterium dentium Bd1, complete genomeCRISPR-associated helicase Cas33e-0654.3
NC_003901:678340:6852926852926877242433Methanosarcina mazei Go1, complete genomehypothetical protein5e-0653.9
NC_016609:5986500:5992325599232559950962772Niastella koreensis GR20-10 chromosome, complete genomeCRISPR-associated HD domain-containing protein7e-0653.1
NC_009438:2058566:2071093207109320740292937Shewanella putrefaciens CN-32 chromosome, complete genomeDEAD/DEAH box helicase8e-0653.1