Pre_GI: BLASTN Hits

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Query: NC_015957:8816355 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 8816355, End: 8834123, Length: 17769

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013093:31578973157897318209324197Actinosynnema mirum DSM 43827, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_013854:3200912*3200912322443023519Azospirillum sp. B510, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013854:33054333054335359923057Azospirillum sp. B510, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_013172:31417393141739316451822780Brachybacterium faecium DSM 4810, complete genome8e-0660BLASTN svgBLASTP svg
NC_010515:24491432449143247210722965Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence3e-0867.9BLASTN svgBLASTP svg
NC_013716:12989321298932132714328212Citrobacter rodentium ICC168, complete genome8e-0660BLASTN svgBLASTP svg
NC_007164:453743*45374347209918357Corynebacterium jeikeium K411, complete genome9e-1589.7BLASTN svgBLASTP svg
NC_007907:34724943472494349615323660Desulfitobacterium hafniense Y51, complete genome8e-0660BLASTN svgBLASTP svg
NC_015387:10914031091403111519023788Marinithermus hydrothermalis DSM 14884 chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_011894:792827928211536336082Methylobacterium nodulans ORS 2060, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_007644:626992*62699269973472743Moorella thermoacetica ATCC 39073, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_014210:41884484188448421709828651Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,9e-0969.9BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007494:86790186790189976631866Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence9e-0969.9BLASTN svgBLASTP svg
NC_011958:92378992378995236428576Rhodobacter sphaeroides KD131 chromosome 2, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013521:94049594049596409923605Sanguibacter keddieii DSM 10542, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_020211:22065002206500222782621327Serratia marcescens WW4, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015976:2900891*2900891292514524255Sphingobium sp. SYK-6, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_015976:1893076*1893076193522042145Sphingobium sp. SYK-6, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_021177:4912982*4912982493562522644Streptomyces fulvissimus DSM 40593, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_010572:3363830*3363830342121457385Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_018750:3141196*3141196316047319278Streptomyces venezuelae ATCC 10712, complete genome1e-50208BLASTN svgBLASTP svg
NC_018750:26687832668783269022121439Streptomyces venezuelae ATCC 10712, complete genome8e-0660BLASTN svgBLASTP svg
NC_018750:4688968*4688968471073821771Streptomyces venezuelae ATCC 10712, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015957:87776448777644879959921956Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_008786:13320411332041135577823738Verminephrobacter eiseniae EF01-2, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_008786:17673151767315179053023216Verminephrobacter eiseniae EF01-2, complete genome2e-0661.9BLASTN svgBLASTP svg