Pre_GI: BLASTN Hits

Some Help

Query: NC_015957:6282179 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 6282179, End: 6308599, Length: 26421

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015514:18177318177320534923577Cellulomonas fimi ATCC 484 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015064:28711522871152289427523124Acidobacterium sp. MP5ACTX9 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014722:115359353593Burkholderia rhizoxinica HKI 454, complete genome8e-0763.9BLASTN svgBLASTP svg