Pre_GI: BLASTN Hits

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Query: NC_015957:3282183 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 3282183, End: 3305811, Length: 23629

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014098:1553900*1553900157609922200Bacillus tusciae DSM 2912 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010552:29370329370332259928897Burkholderia ambifaria MC40-6 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_007963:32253063225306325338328078Chromohalobacter salexigens DSM 3043, complete genome1e-20109BLASTN svgBLASTP svg
NC_015683:22799042279904231865238749Corynebacterium ulcerans BR-AD22 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020063:23438132343813236609922287Enterobacteriaceae bacterium strain FGI 57, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008278:29723232972323301617343851Frankia alni ACN14a, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014915:33207683320768336792347156Geobacillus sp. Y412MC52 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013411:33147993314799335852243724Geobacillus sp. Y412MC61, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014532:2108897*2108897214516836272Halomonas elongata DSM 2581, complete genome4e-27131BLASTN svgBLASTP svg
NC_013174:1459730*1459730148266422935Jonesia denitrificans DSM 20603, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010617:19103881910388192887618489Kocuria rhizophila DC2201, complete genome2e-69272BLASTN svgBLASTP svg
NC_006087:23261432326143235421928077Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008595:26872452687245272814940905Mycobacterium avium 104, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013235:1938889*1938889196008021192Nakamurella multipartita DSM 44233, complete genome2e-127464BLASTN svgBLASTP svg
NC_018681:867230*86723090173034501Nocardia brasiliensis ATCC 700358 chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_008269:86800086800091059942600Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence2e-72281BLASTN svgBLASTP svg
NC_009142:25655612565561258937023810Saccharopolyspora erythraea NRRL 2338, complete genome0908BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_019892:7822000*7822000787572053721Singulisphaera acidiphila DSM 18658 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013947:33471743347174338411536942Stackebrandtia nassauensis DSM 44728 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003155:5163382*5163382518745824077Streptomyces avermitilis MA-4680, complete genome7e-112412BLASTN svgBLASTP svg
NC_021177:5697210*5697210572187724668Streptomyces fulvissimus DSM 40593, complete genome0660BLASTN svgBLASTP svg
NC_021177:78157917815791783813922349Streptomyces fulvissimus DSM 40593, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010572:45054284505428452522719800Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_018750:50787055078705510289824194Streptomyces venezuelae ATCC 10712, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_018750:5399316*5399316541712617811Streptomyces venezuelae ATCC 10712, complete genome0684BLASTN svgBLASTP svg
NC_018750:77050077050079437823879Streptomyces venezuelae ATCC 10712, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-35157BLASTN svgBLASTP svg
NC_015957:19600019600021778021781Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015957:10505870105058701052808222213Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_013595:89189789189791154419648Streptosporangium roseum DSM 43021, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014831:18189681818968184009921132Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014165:20819142081914210211520202Thermobispora bispora DSM 43833 chromosome, complete genome9e-25123BLASTN svgBLASTP svg
NC_013510:39975*399756221822244Thermomonospora curvata DSM 43183, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012792:38567038567040991424245Variovorax paradoxus S110 chromosome 2, complete genome8e-53216BLASTN svgBLASTP svg
NC_015434:35070593507059353432627268Verrucosispora maris AB-18-032 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg