Pre_GI: BLASTP Hits

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Query: NC_015957:6029542:6030378 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 6030378, End: 6031070, Length: 693

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:3363830:340739834073983408090693Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA repair protein2e-88325
NC_013169:612456:644048644048644719672Kytococcus sedentarius DSM 20547, complete genomeDNA-N1-methyladenine dioxygenase2e-76285
NC_013595:4951396:495930249593024959943642Streptosporangium roseum DSM 43021, complete genomealkylated DNA repair protein5e-63240
NC_015859:1099919:110426911042691104940672Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein9e-53206
NC_017317:134671:140308140308140931624Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein4e-31134
NC_008009:1264791:127010812701081270752645Acidobacteria bacterium Ellin345, complete genome2OG-Fe(II) oxygenase4e-1891.7
NC_013971:2408522:243410224341022434776675Erwinia amylovora ATCC 49946 chromosome, complete genomealkylated DNA repair protein4e-1788.2
NC_013961:2370994:239657423965742397248675Erwinia amylovora, complete genomeAlpha-ketoglutarate-dependent dioxygenase alkB4e-1788.2
NC_015224:3820338:383828338382833838948666Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,alkylated DNA repair protein5e-1684.7
NC_008800:3955284:396000839600083960673666Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,alkylated DNA repair protein9e-1684
NC_014618:1593360:159441815944181595089672Enterobacter cloacae SCF1 chromosome, complete genome2OG-Fe(II) oxygenase3e-1582
NC_016002:3813039:381303938130393813686648Pseudogulbenkiania sp. NH8B, complete genome2OG-Fe(II) oxygenase3e-1582
NC_007974:138176:158829158829159413585Ralstonia metallidurans CH34 chromosome 2, complete sequence2OG-Fe(II) oxygenase2e-1479
NC_008314:2686851:268753126875312688193663Ralstonia eutropha H16 chromosome 2, complete sequenceAlkylated DNA repair protein2e-1479
NC_007510:1921251:194723819472381947882645Burkholderia sp. 383 chromosome 1, complete sequence2OG-Fe(II) oxygenase1e-1376.6
NC_006905:2355290:237676523767652377415651Salmonella enterica subsp. enterica serovar Choleraesuis strDNA repair system specific for alkylated DNA5e-1374.7
NC_003197:2327474:236248123624812363131651Salmonella typhimurium LT2, complete genomeDNA repair system protein5e-1374.7
NC_011149:2294500:231396423139642314614651Salmonella enterica subsp. enterica serovar Agona str. SL483,alpha-ketoglutarate-dependent dioxygenase AlkB5e-1374.7
NC_011083:2375061:241004424100442410694651Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,alpha-ketoglutarate-dependent dioxygenase AlkB5e-1374.7
NC_003198:2297837:231943223194322320082651Salmonella enterica subsp. enterica serovar Typhi str. CT18,AlkB protein5e-1374.7
NC_016810:2325190:236019723601972360847651Salmonella enterica subsp. enterica serovar Typhimurium strAlkB protein5e-1374.7
NC_016856:2379027:241403424140342414684651Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA repair system protein5e-1374.7
NC_016857:2325190:236019723601972360847651Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA repair system protein5e-1374.7
NC_016860:2323017:235802423580242358674651Salmonella enterica subsp. enterica serovar Typhimurium stralpha-ketoglutarate-dependent dioxygenase AlkB5e-1374.7
NC_016863:2324293:236222623622262362876651Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA repair system protein5e-1374.7
NC_017046:2324554:235956123595612360211651Salmonella enterica subsp. enterica serovar Typhimurium str. 798AlkB protein5e-1374.7
NC_011274:2325840:234741723474172348067651Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91AlkB protein4e-1374.7
NC_011294:2334979:235654823565482357198651Salmonella enterica subsp. enterica serovar Enteritidis strAlkB protein4e-1374.7
NC_010002:4175809:417580941758094176468660Delftia acidovorans SPH-1, complete genome2OG-Fe(II) oxygenase7e-1374.3
NC_011205:2462025:248363424836342484284651Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853alpha-ketoglutarate-dependent dioxygenase AlkB7e-1374.3
NC_011094:2348491:236825923682592368909651Salmonella enterica subsp. enterica serovar Schwarzengrund stralpha-ketoglutarate-dependent dioxygenase AlkB6e-1374.3
NC_011080:2342672:236424423642442364894651Salmonella enterica subsp. enterica serovar Newport str. SL254,alpha-ketoglutarate-dependent dioxygenase AlkB6e-1374.3
NC_007510:1921251:194244819424481943098651Burkholderia sp. 383 chromosome 1, complete sequence2OG-Fe(II) oxygenase9e-1270.5
NC_015563:3401867:342182434218243422474651Delftia sp. Cs1-4 chromosome, complete genome2OG-Fe(II) oxygenase2e-1169.7