Pre_GI: BLASTP Hits

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Query: NC_015848:3851230:3859884 Mycobacterium canettii CIPT 140010059, complete genome

Start: 3859884, End: 3860537, Length: 654

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019950:3818000:382327538232753823928654Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein2e-120431
NC_002945:3735141:374379637437963744449654Mycobacterium bovis AF2122/97, complete genomehypothetical protein4e-120430
NC_009565:3793976:380263138026313803284654Mycobacterium tuberculosis F11, complete genomehypothetical protein4e-120430
NC_012207:3766978:377563337756333776286654Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein4e-120430
NC_008769:3769065:377772037777203778373654Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein4e-120430
NC_002755:3773734:378238937823893783042654Mycobacterium tuberculosis CDC1551, complete genomehydrolase, haloacid dehalogenase-like family4e-120430
NC_000962:3781501:379015637901563790809654Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein4e-120430
NC_009525:3794000:379927937992793799932654Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein4e-120430
NC_012943:3777371:378602637860263786679654Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein4e-120430
NC_016768:3774105:378276037827603783413654Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein4e-120430
NC_016804:3753243:375708537570853757738654Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein4e-120430
NC_017026:3754000:375940837594083760061654Mycobacterium tuberculosis RGTB327 chromosome, complete genomeputative HAD superfamily hydrolase4e-120430
NC_014761:1588755:160430216043021604967666Oceanithermus profundus DSM 14977 chromosome, complete genomehad-superfamily hydrolase, subfamily ia, variant 38e-1787
NC_014550:3263783:326643532664353267112678Arthrobacter arilaitensis Re117, complete genomehaloacid dehalogenase-like family hydrolase2e-1066.2
NC_014210:2372813:237500823750082375742735Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,HAD-superfamily hydrolase, subfamily IA, variant 13e-1065.1
NC_016791:1266404:127043312704331271113681Clostridium sp. BNL1100 chromosome, complete genomebeta-phosphoglucomutase6e-1064.3
NC_011898:3772899:378689237868923787551660Clostridium cellulolyticum H10, complete genomebeta-phosphoglucomutase3e-0962
NC_012108:3922511:392624439262443926930687Desulfobacterium autotrophicum HRM2, complete genomeputative (S)-2-haloacid dehalogenase (2-haloalkanoic acid dehalogenase) (L-2-haloacid dehalogenase) (DEHC)4e-0858.5
NC_008262:297960:320522320522321175654Clostridium perfringens SM101, complete genomehaloacid dehalogenase, IA family protein5e-0857.8
NC_016109:3875617:387905938790593879682624Kitasatospora setae KM-6054, complete genomeputative hydrolase1e-0757
NC_010067:3538169:356629935662993566898600Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-0857
NC_011080:4177443:419707741970774197676600Salmonella enterica subsp. enterica serovar Newport str. SL254,phosphatase YihX8e-0857
NC_006624:405966:408815408815409468654Thermococcus kodakarensis KOD1, complete genomehydrolase, HAD superfamily1e-0756.6
NC_015578:2341026:234102623410262341655630Treponema primitia ZAS-2 chromosome, complete genomeHAD superfamily hydrolase1e-0756.6
NC_012039:257962:276720276720277355636Campylobacter lari RM2100, complete genomeHAD-superfamily hydrolase1e-0756.2
NC_013525:556036:562936562936563637702Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 32e-0755.8
NC_013282:4312791:433241243324124333011600Cronobacter turicensis, complete genomePhosphatase yihX2e-0755.8
NC_015275:443213:447207447207447866660Clostridium lentocellum DSM 5427 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 33e-0755.5
NC_015434:2460053:246815624681562468800645Verrucosispora maris AB-18-032 chromosome, complete genomeHAD family hydrolase3e-0755.1
NC_008261:304000:325782325782326435654Clostridium perfringens ATCC 13124, complete genomehaloacid dehalogenase, IA family protein7e-0754.3
NC_003366:332500:354420354420355073654Clostridium perfringens str. 13, complete genomehypothetical protein7e-0754.3
NC_014655:614874:631843631843632481639Leadbetterella byssophila DSM 17132 chromosome, complete genomebeta-phosphoglucomutase7e-0753.9
NC_009380:2253500:226026222602622260909648Salinispora tropica CNB-440 chromosome, complete genomeHAD family hydrolase1e-0653.5
NC_007614:2675302:269663426966342697317684Nitrosospira multiformis ATCC 25196 chromosome 1, completephosphoglycolate phosphatase1e-0653.1
NC_013523:2560000:258197225819722582649678Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 11e-0653.1
NC_014720:2420455:244171424417142442478765Caldicellulosiruptor kronotskyensis 2002 chromosome, completebeta-phosphoglucomutase family hydrolase2e-0652.8
NC_019673:7951493:795430679543067955043738Saccharothrix espanaensis DSM 44229 complete genomeHAD-superfamily hydrolase, subfamily IA, variant 12e-0652.8
NC_011147:1573470:159101315910131591681669Salmonella enterica subsp. enterica serovar Paratyphi A str2-deoxyglucose-6-phosphatase2e-0652.8
NC_006511:1579776:159583215958321596500669Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative hydrolase2e-0652.8
NC_011205:1938574:195461719546171955285669Salmonella enterica subsp. enterica serovar Dublin str. CT_020218532-deoxyglucose-6-phosphatase2e-0652.4
NC_010102:1703172:171922617192261719894669Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0652.4
NC_014721:373607:388190388190388861672Caldicellulosiruptor kristjanssonii 177R1B chromosome, completebeta-phosphoglucomutase family hydrolase4e-0651.6
NC_012811:410776:414397414397415077681Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative Hydrolase (HAD superfamily)4e-0651.2
NC_013892:202778:224222224222224881660Xenorhabdus bovienii SS-2004 chromosome, complete genomephosphatase-like domain-containing protein5e-0651.2
NC_015760:343874:363219363219363857639Streptococcus salivarius CCHSS3, complete genomeputative sugar phosphatase of HAD family5e-0651.2
NC_013162:811763:825589825589826212624Capnocytophaga ochracea DSM 7271, complete genomebeta-phosphoglucomutase5e-0651.2
NC_005296:4574213:457894045789404579608669Rhodopseudomonas palustris CGA009, complete genomeHaloacid dehalogenase-like hydrolase5e-0651.2
NC_011274:1850086:186613918661391866807669Salmonella enterica subsp. enterica serovar Gallinarum str. 287/912-deoxyglucose-6-phosphatase6e-0650.8
NC_011294:1810285:182632818263281826996669Salmonella enterica subsp. enterica serovar Enteritidis str2-deoxyglucose-6-phosphatase6e-0650.8
NC_016810:1358456:135919313591931359861669Salmonella enterica subsp. enterica serovar Typhimurium strputative hydrolase6e-0650.8
NC_016856:1411579:141231614123161412984669Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S2-deoxyglucose-6-phosphatase6e-0650.8
NC_016857:1358456:135919313591931359861669Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/742-deoxyglucose-6-phosphatase6e-0650.8
NC_016860:1399290:140002714000271400695669Salmonella enterica subsp. enterica serovar Typhimurium str2-deoxyglucose-6-phosphatase6e-0650.8
NC_016863:1359769:136050613605061361174669Salmonella enterica subsp. enterica serovar Typhimurium str. UK-12-deoxyglucose-6-phosphatase6e-0650.8
NC_003197:1401603:140234014023401403008669Salmonella typhimurium LT2, complete genomeputative enzyme6e-0650.8