Pre_GI: BLASTP Hits

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Query: NC_015848:2684275:2690027 Mycobacterium canettii CIPT 140010059, complete genome

Start: 2690027, End: 2691202, Length: 1176

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:1769332:1782380178238017835551176Mycobacterium tuberculosis KZN 4207 chromosome, complete genomePPE family protein9e-86317
NC_015848:2684275:2692091269209126932661176Mycobacterium canettii CIPT 140010059, complete genomePPE family protein1e-85317
NC_009525:2635792:2642827264282726440021176Mycobacterium tuberculosis H37Ra, complete genomePPE family protein9e-86317
NC_009525:2635792:2644891264489126460661176Mycobacterium tuberculosis H37Ra, complete genomePPE family protein9e-86317
NC_012943:1769445:1779051177905117802261176Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein9e-86317
NC_012943:1769445:1782493178249317836681176Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein9e-86317
NC_016768:1769332:1778938177893817801131176Mycobacterium tuberculosis KZN 4207 chromosome, complete genomePPE family protein9e-86317
NC_010612:4501414:4507776450777645089391164Mycobacterium marinum M, complete genomePPE family protein5e-54212
NC_010612:4501414:4509889450988945110551167Mycobacterium marinum M, complete genomePPE family protein7e-47188
NC_002945:3429315:3444248344424834454231176Mycobacterium bovis AF2122/97, complete genomePPE family protein1e-43177
NC_002755:3465582:3486273348627334874481176Mycobacterium tuberculosis CDC1551, complete genomePPE family protein9e-44177
NC_009565:3485772:3503599350359935047741176Mycobacterium tuberculosis F11, complete genomePPE family protein9e-44177
NC_000962:3474000:3490476349047634916511176Mycobacterium tuberculosis H37Rv, complete genomePPE FAMILY PROTEIN9e-44177
NC_009525:3484924:3502632350263235038071176Mycobacterium tuberculosis H37Ra, complete genomePPE family protein9e-44177
NC_017026:3466809:3484534348453434857091176Mycobacterium tuberculosis RGTB327 chromosome, complete genomePPE family protein9e-44177
NC_016804:3407859:342187834218783422726849Mycobacterium bovis BCG str. Mexico chromosome, complete genomePPE family protein6e-41168
NC_008769:3427254:344251334425133443361849Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomePPE family protein6e-41168
NC_012207:3421144:343516334351633436011849Mycobacterium bovis BCG str. Tokyo 172, complete genomePPE family protein6e-41168
NC_017904:3113000:3128391312839131295811191Mycobacterium sp. MOTT36Y chromosome, complete genomePPE family protein2e-20100
NC_017904:4742775:4742775474277547439621188Mycobacterium sp. MOTT36Y chromosome, complete genomePPE family protein2e-1893.6
NC_010612:5653031:5659834565983456688549021Mycobacterium marinum M, complete genomePPE family protein9e-1891.7
NC_010612:5301135:5316112531611253179771866Mycobacterium marinum M, complete genomePPE family protein4e-1789.4
NC_017904:4742775:4751684475168447529011218Mycobacterium sp. MOTT36Y chromosome, complete genomePPE family protein1e-1688.2
NC_010612:5236229:5254885525488552560841200Mycobacterium marinum M, complete genomePPE family protein7e-1685.5
NC_010612:5301135:5318444531844453217643321Mycobacterium marinum M, complete genomePPE family protein4e-1582.8
NC_017026:829444:8494948494948505491056Mycobacterium tuberculosis RGTB327 chromosome, complete genomePPE family protein4e-1479.3
NC_020133:5710661:5722718572271857243311614Mycobacterium liflandii 128FXT, complete genomePPE family protein6e-1479
NC_010612:6113155:6127439612743961290521614Mycobacterium marinum M, complete genomePPE family protein6e-1479
NC_010612:5236229:5253610525361052548031194Mycobacterium marinum M, complete genomePPE family protein4e-1376.3
NC_020133:4841932:4855056485505648562491194Mycobacterium liflandii 128FXT, complete genomePPE family protein5e-1375.9
NC_016948:1074034:1077351107735110785051155Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein1e-1274.7
NC_017904:4742775:4758520475852047596621143Mycobacterium sp. MOTT36Y chromosome, complete genomePPE family protein1e-1274.3
NC_016768:830000:8493058493058512451941Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein1e-1171.6
NC_012943:830000:8493018493018512411941Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein1e-1171.6
NC_012207:831030:8502468502468521831938Mycobacterium bovis BCG str. Tokyo 172, complete genomePPE family protein1e-1171.2
NC_002945:831029:8502938502938522301938Mycobacterium bovis AF2122/97, complete genomePPE family protein1e-1171.2
NC_002677:1380000:1381004138100413822691266Mycobacterium leprae TN, complete genomePPE-family protein7e-1065.5
NC_011896:1380000:1381044138104413822971254Mycobacterium leprae Br4923, complete genomePPE-family protein7e-1065.5
NC_017904:4742775:4756674475667447578071134Mycobacterium sp. MOTT36Y chromosome, complete genomePPE family protein1e-0964.3
NC_020133:4841932:4856376485637648575301155Mycobacterium liflandii 128FXT, complete genomePPE family protein3e-0859.7
NC_002944:4147431:4159503415950341610171515Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein9e-0858.2