Pre_GI: BLASTP Hits

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Query: NC_015848:2684275:2685884 Mycobacterium canettii CIPT 140010059, complete genome

Start: 2685884, End: 2687422, Length: 1539

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009525:2635792:2638685263868526402231539Mycobacterium tuberculosis H37Ra, complete genomemembrane-associated phospholipase C 20939
NC_016768:1769332:1786132178613217876971566Mycobacterium tuberculosis KZN 4207 chromosome, complete genomemembrane-associated phospholipase C 2 plcB0937
NC_012943:1769445:1786245178624517878101566Mycobacterium tuberculosis KZN 1435 chromosome, complete genomemembrane-associated phospholipase C 2 plcB0937
NC_016768:1769332:1784379178437917859411563Mycobacterium tuberculosis KZN 4207 chromosome, complete genomemembrane-associated phospholipase C 1 plcA0724
NC_012943:1769445:1784492178449217860541563Mycobacterium tuberculosis KZN 1435 chromosome, complete genomemembrane-associated phospholipase C 1 plcA0724
NC_015848:2684275:2687640268764026891781539Mycobacterium canettii CIPT 140010059, complete genomeputative membrane-associated phospholipase C 1 PLCA0723
NC_009525:2635792:2640441264044126419791539Mycobacterium tuberculosis H37Ra, complete genomemembrane-associated phospholipase C 10723
NC_010612:4501414:4503965450396545055271563Mycobacterium marinum M, complete genomemembrane-associated phospholipase C 2 PlcB_40709
NC_016768:1769332:1787756178775617893061551Mycobacterium tuberculosis KZN 4207 chromosome, complete genomephospholipase C 3 plcC0636
NC_012943:1769445:1787869178786917894191551Mycobacterium tuberculosis KZN 1435 chromosome, complete genomephospholipase C 3 plcC0636
NC_015848:2684275:2684275268427526858011527Mycobacterium canettii CIPT 140010059, complete genomeputative phospholipase C 3 PLCC0635
NC_009525:2635792:2637076263707626386021527Mycobacterium tuberculosis H37Ra, complete genomephospholipase C 3 PlcC0635
NC_010612:4501414:4502018450201845035681551Mycobacterium marinum M, complete genomemembrane-associated phospholipase C 2 PlcB_50633
NC_016111:3659269:3660420366042036618351416Streptomyces cattleya NRRL 8057, complete genomeNon-hemolytic phospholipase C1e-79297
NC_012721:2556160:2583724258372425857902067Burkholderia glumae BGR1 chromosome 2, complete genomeTwin-arginine translocation pathway signal1e-72274
NC_018681:5695343:5734401573440157358401440Nocardia brasiliensis ATCC 700358 chromosome, complete genomePhospholipase C7e-71268
NC_013929:1537980:1541644154164415436622019Streptomyces scabiei 87.22 chromosome, complete genomephospholipase C3e-68259
NC_007435:1914375:1917409191740919196582250Burkholderia pseudomallei 1710b chromosome II, complete sequencephospholipase C3e-64246
NC_009075:92210:9547895478976732196Burkholderia pseudomallei 668 chromosome II, complete sequencenon-hemolytic phospholipase C (Precursor)3e-64246
NC_009078:74954:7824378243804382196Burkholderia pseudomallei 1106a chromosome II, complete sequenceNon-hemolytic phospholipase C6e-64245
NC_006351:73000:7617476174783692196Burkholderia pseudomallei K96243 chromosome 2, complete sequencephospholipase C precursor8e-64244
NC_015856:764651:7878857878857903592475Collimonas fungivorans Ter331 chromosome, complete genomephosphoesterase1e-62241
NC_006512:2789098:2791506279150627935452040Idiomarina loihiensis L2TR, complete genomePhospholipase C1e-61237
NC_007650:84140:8657386573888222250Burkholderia thailandensis E264 chromosome II, complete sequencephospholipase C8e-60231
NC_015566:4662171:4664013466401346661602148Serratia sp. AS12 chromosome, complete genomephospholipase C, phosphocholine-specific1e-58228
NC_008314:1202963:1205830120583012080102181Ralstonia eutropha H16 chromosome 2, complete sequencePhospholipase C3e-54213
NC_014816:545441:5693835693835714552073Asticcacaulis excentricus CB 48 chromosome 1, complete sequencephospholipase c, phosphocholine-specific3e-54213
NC_015856:29338:4683446834492992466Collimonas fungivorans Ter331 chromosome, complete genomenon-hemolytic phospholipase C1e-49197
NC_009485:1222697:1238891123889112412392349Bradyrhizobium sp. BTAi1 chromosome, complete genomenon-hemolytic phospholipase C2e-48194
NC_017075:2293209:2304161230416123065212361Rubrivivax gelatinosus IL144, complete genomephospholipase C1e-44181
NC_012483:3144689:3164547316454731670602514Acidobacterium capsulatum ATCC 51196, complete genomeTat pathway signal sequence domain protein2e-37157
NC_016609:3576490:3577020357702035795602541Niastella koreensis GR20-10 chromosome, complete genomephospholipase C, phosphocholine-specific3e-32140
NC_010162:9727465:9731579973157997328081230Sorangium cellulosum 'So ce 56', complete genomephosphoesterase precursor5e-23109
NC_013061:2775623:2778967277896727802831317Pedobacter heparinus DSM 2366, complete genomeacid phosphatase8e-1892.4
NC_017276:2240069:2255775225577522573041530Sulfolobus islandicus REY15A chromosome, complete genomephosphoesterase3e-1480.5
NC_017275:2364948:2377093237709323786221530Sulfolobus islandicus HVE10/4 chromosome, complete genomephosphoesterase3e-1480.5
NC_012589:2457385:2470512247051224720411530Sulfolobus islandicus L.S.2.15, complete genomephosphoesterase5e-1479.7
NC_012623:192455:1931031931031946321530Sulfolobus islandicus Y.N.15.51 chromosome, complete genomephosphoesterase6e-1479.3
NC_013769:2445245:2456495245649524580241530Sulfolobus islandicus L.D.8.5 chromosome, complete genomephosphoesterase8e-1479
NC_012726:2318000:2331431233143123329601530Sulfolobus islandicus M.16.4 chromosome, complete genomephosphoesterase8e-1479
NC_010625:1551430:1585835158583515873251491Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencePhospholipase C3e-1377