Pre_GI: BLASTP Hits

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Query: NC_015848:1708176:1722270 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1722270, End: 1724069, Length: 1800

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019950:1689910:1702855170285517046541800Mycobacterium canettii CIPT 140060008 complete genomeMembrane protein of unknown function01158
NC_009565:1688642:1702732170273217045311800Mycobacterium tuberculosis F11, complete genomehypothetical membrane protein01155
NC_000962:1684005:1698095169809516998941800Mycobacterium tuberculosis H37Rv, complete genomeProbable membrane protein01155
NC_009525:1685522:1699612169961217014111800Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein01155
NC_002755:1684161:1698251169825117000501800Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein01155
NC_012943:2707677:2713572271357227153711800Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein01155
NC_016768:2704350:2710245271024527120441800Mycobacterium tuberculosis KZN 4207 chromosome, complete genomemembrane protein01155
NC_017026:1686500:1699248169924817006781431Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein0811
NC_016604:297687:3263473263473278851539Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein1e-145517
NC_010612:2777687:2795598279559827971661569Mycobacterium marinum M, complete genomehypothetical protein5e-137488