Pre_GI: BLASTP Hits

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Query: NC_015848:1647523:1666637 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1666637, End: 1667422, Length: 786

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:2764000:276687027668702767655786Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeantibiotic-transport membrane ABC transporter3e-110397
NC_002945:1621765:163928316392831640068786Mycobacterium bovis AF2122/97, complete genomeunidentified antibiotic-transport integral membrane ABC transporter3e-110397
NC_009565:1629780:164712116471211647906786Mycobacterium tuberculosis F11, complete genomehypothetical antibiotic-transport integral membrane ABC transporter3e-110397
NC_012522:7596039:762496576249657625759795Rhodococcus opacus B4, complete genomeputative ABC transporter permease protein6e-57221
NC_016800:1243000:131066213106621311459798Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein6e-30131
NC_002935:1237585:130840513084051309202798Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein5e-30131
NC_016799:1268706:133755013375501338347798Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein9e-30130
NC_016782:1251796:128209412820941282891798Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein6e-30130
NC_016783:1274000:130639413063941307191798Corynebacterium diphtheriae INCA 402 chromosome, complete genomehypothetical protein6e-30130
NC_016786:1251765:128206312820631282860798Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein6e-30130
NC_016787:1240000:127151312715131272310798Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein6e-30130
NC_016788:1214026:128150412815041282301798Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein6e-30130
NC_016790:1218596:124889212488921249689798Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein6e-30130
NC_016802:1256287:128299512829951283792798Corynebacterium diphtheriae HC02 chromosome, complete genomehypothetical protein6e-30130
NC_014643:2056280:210771921077192108549831Rothia dentocariosa ATCC 17931 chromosome, complete genomeABC transporter4e-26118
NC_013526:530212:544312544312545037726Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeABC-2 type transporter5e-21101