Pre_GI: BLASTP Hits

Some Help

Query: NC_015848:1647523:1665593 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1665593, End: 1666525, Length: 933

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:2764000:276776727677672768699933Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeantibiotic-transport membrane ABC transporter1e-97356
NC_009565:1629780:164607716460771647009933Mycobacterium tuberculosis F11, complete genomehypothetical antibiotic-transport integral membrane ABC transporter1e-97356
NC_002945:1621765:163823916382391639171933Mycobacterium bovis AF2122/97, complete genomeunidentified antibiotic-transport integral membrane ABC transporter1e-97356
NC_012522:7596039:760349276034927604454963Rhodococcus opacus B4, complete genomehypothetical membrane protein2e-61236
NC_016800:1243000:131154013115401312478939Corynebacterium diphtheriae BH8 chromosome, complete genomecytochrome aa3 controlling protein3e-37155
NC_016783:1274000:130727213072721308210939Corynebacterium diphtheriae INCA 402 chromosome, complete genomecytochrome aa3 controlling protein3e-37155
NC_016788:1214026:128238212823821283320939Corynebacterium diphtheriae HC04 chromosome, complete genomecytochrome aa3 controlling protein3e-37155
NC_016790:1218596:124977012497701250708939Corynebacterium diphtheriae VA01 chromosome, complete genomecytochrome aa3 controlling protein3e-37155
NC_016802:1256287:128387312838731284811939Corynebacterium diphtheriae HC02 chromosome, complete genomecytochrome aa3 controlling protein3e-37155
NC_002935:1237585:130928313092831310221939Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein3e-37155
NC_016782:1251796:128297212829721283910939Corynebacterium diphtheriae 241 chromosome, complete genomecytochrome aa3 controlling protein3e-37155
NC_016786:1251765:128294112829411283879939Corynebacterium diphtheriae HC01 chromosome, complete genomecytochrome aa3 controlling protein3e-37155
NC_016799:1268706:133842813384281339366939Corynebacterium diphtheriae 31A chromosome, complete genomecytochrome aa3 controlling protein3e-37155
NC_009664:3718927:372174037217403722636897Kineococcus radiotolerans SRS30216, complete genomecytochrome oxidase assembly6e-1168.2
NC_014643:2056280:2106577210657721076231047Rothia dentocariosa ATCC 17931 chromosome, complete genomehypothetical protein2e-0860.1