Pre_GI: BLASTP Hits

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Query: NC_015848:1647523:1648487 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1648487, End: 1650031, Length: 1545

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:2764000:2783452278345227849961545Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase zwf201054
NC_009565:1629780:1629780162978016313241545Mycobacterium tuberculosis F11, complete genomeglucose-6-phosphate 1-dehydrogenase01054
NC_002945:1621765:1621765162176516233091545Mycobacterium bovis AF2122/97, complete genomeglucose-6-phosphate 1-dehydrogenase01054
NC_020133:2886541:2884991288499128865441554Mycobacterium liflandii 128FXT, complete genomeglucose-6-phosphate 1-dehydrogenase Zwf20966
NC_012522:7596039:7596039759603975975831545Rhodococcus opacus B4, complete genomeglucose-6-phosphate 1-dehydrogenase0867
NC_002935:1315019:1315019131501913166681650Corynebacterium diphtheriae NCTC 13129, complete genomeglucose-6-phosphate 1-dehydrogenase0740
NC_016783:1274000:1313008131300813146571650Corynebacterium diphtheriae INCA 402 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase0740
NC_016783:1313008:1313008131300813146571650Corynebacterium diphtheriae INCA 402 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase0740
NC_016789:1334514:1334514133451413361631650Corynebacterium diphtheriae PW8 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase0740
NC_016800:1317276:1317276131727613189251650Corynebacterium diphtheriae BH8 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase0740
NC_016802:1256287:1289608128960812912571650Corynebacterium diphtheriae HC02 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase0740
NC_016787:1276983:1278148127814812797761629Corynebacterium diphtheriae HC03 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase0740
NC_016788:1286974:1288139128813912897671629Corynebacterium diphtheriae HC04 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase0740
NC_016801:1333860:1333860133386013354881629Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase0740
NC_016785:1270295:1270295127029512719441650Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase0737
NC_016799:1343020:1344164134416413458071644Corynebacterium diphtheriae 31A chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase0736
NC_018524:5748421:5751846575184657533961551Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeglucose-6-phosphate dehydrogenase0720
NC_014643:2056280:2099915209991521014681554Rothia dentocariosa ATCC 17931 chromosome, complete genomeglucose-6-phosphate dehydrogenase0665
NC_016884:2568920:2572631257263125741571527Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase2e-135483
NC_015757:963447:9768689768689783941527Sulfobacillus acidophilus TPY chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase2e-135483
NC_014355:399938:4168094168094183381530Candidatus Nitrospira defluvii, complete genomeglucose-6-phosphate 1-dehydrogenase4e-120432
NC_007925:4060635:4086710408671040882241515Rhodopseudomonas palustris BisB18, complete genomeglucose-6-phosphate 1-dehydrogenase9e-115414
NC_013205:2610956:2628233262823326297951563Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,glucose-6-phosphate 1-dehydrogenase2e-110399
NC_013037:6209424:6251652625165262531601509Dyadobacter fermentans DSM 18053, complete genomeglucose-6-phosphate 1-dehydrogenase4e-110398
NC_007508:4765751:4776771477677147786001830Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeglucose-6-phosphate 1-dehydrogenase1e-108394
NC_015510:3375205:3399447339944734009701524Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase2e-108393
NC_009439:4913767:4918054491805449195531500Pseudomonas mendocina ymp, complete genomeglucose-6-phosphate 1-dehydrogenase2e-106386
NC_004663:1499145:1518212151821215197081497Bacteroides thetaiotaomicron VPI-5482, complete genomeglucose-6-phosphate 1-dehydrogenase6e-106385
NC_013855:1268424:1280995128099512825151521Azospirillum sp. B510 plasmid pAB510a, complete sequenceglucose-6-phosphate 1-dehydrogenase1e-105384
NC_013421:2306000:2307344230734423088191476Pectobacterium wasabiae WPP163, complete genomeglucose-6-phosphate 1-dehydrogenase2e-105383
NC_013361:2591829:2593875259387525953501476Escherichia coli O26:H11 str. 11368 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase5e-105382
NC_013364:2355298:2357344235734423588191476Escherichia coli O111:H- str. 11128, complete genomeglucose-6-phosphate dehydrogenase7e-105381
NC_011741:1978500:1980580198058019820551476Escherichia coli IAI1 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase9e-105380
NC_007384:1355060:1371985137198513734601476Shigella sonnei Ss046, complete genomeglucose-6-phosphate dehydrogenase9e-105380
NC_010658:1933605:1935651193565119371261476Shigella boydii CDC 3083-94, complete genomeglucose-6-phosphate 1-dehydrogenase9e-105380
CU928160:1978500:1980580198058019820551476Escherichia coli IAI1 chromosome, complete genomeglucose-6-phosphate dehydrogenase9e-105380
NC_012912:2553391:2570212257021225716871476Dickeya zeae Ech1591, complete genomeglucose-6-phosphate 1-dehydrogenase2e-104380
NC_016822:1339058:1354833135483313563081476Shigella sonnei 53G, complete genomeglucose-6-phosphate 1-dehydrogenase2e-104380
NC_004757:427483:4498594498594513491491Nitrosomonas europaea ATCC 19718, complete genomeGlucose-6-phosphate dehydrogenase1e-103377
NC_015137:2616222:2632621263262126340931473Burkholderia sp. CCGE1001 chromosome 2, complete sequenceglucose-6-phosphate 1-dehydrogenase4e-103375
NC_020134:1328302:1344363134436313458951533Clostridium stercorarium subsp. stercorarium DSM 8532, completeglucose-6-phosphate 1-dehydrogenase Zwf4e-103375
NC_016901:2542110:2544904254490425463761473Shewanella baltica OS678 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase7e-103374
NC_009997:2585588:2585588258558825870601473Shewanella baltica OS195, complete genomeglucose-6-phosphate 1-dehydrogenase7e-103374
NC_014933:3251000:3252934325293432544271494Bacteroides helcogenes P 36-108 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase3e-102372
NC_007952:1416000:1419983141998314214701488Burkholderia xenovorans LB400 chromosome 2, complete sequenceGlucose-6-phosphate dehydrogenase2e-101370
NC_007677:71532:8985089850913641515Salinibacter ruber DSM 13855, complete genomeglucose-6-phosphate 1-dehydrogenase1e-101370
NC_014032:71724:9003290032915461515Salinibacter ruber M8 chromosome, complete genomeglucose-6-phosphate dehydrogenase1e-101370
NC_010172:573046:5959865959865975931608Methylobacterium extorquens PA1, complete genomeglucose-6-phosphate 1-dehydrogenase2e-101369
NC_017514:863485:8880288880288894731446Neisseria meningitidis M01-240149 chromosome, complete genomeglucose-6-phosphate dehydrogenase5e-99362
NC_009921:8549757:8564402856440285659461545Frankia sp. EAN1pec, complete genomeglucose-6-phosphate 1-dehydrogenase2e-98360
NC_020210:2133996:2147596214759621490531458Geobacillus sp. GHH01, complete genomeglucose-6-phosphate 1-dehydrogenase1e-97357
NC_007498:1072112:1088729108872910902281500Pelobacter carbinolicus DSM 2380, complete genomeglucose-6-phosphate 1-dehydrogenase2e-96353
NC_012581:1075663:1081053108105310825371485Bacillus anthracis str. CDC 684 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase3e-93342
NC_009328:2378345:2378345237834523797841440Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase5e-93342
NC_008752:1025980:1025980102598010274461467Acidovorax avenae subsp. citrulli AAC00-1, complete genomeglucose-6-phosphate 1-dehydrogenase1e-92340
NC_012560:1627334:1644393164439316458561464Azotobacter vinelandii DJ, complete genomeGlucose-6-phosphate dehydrogenase1e-91337
NC_021150:1627347:1644406164440616458691464Azotobacter vinelandii CA6, complete genomeglucose-6-phosphate 1-dehydrogenase1e-91337
NC_015563:1129469:1156083115608311575371455Delftia sp. Cs1-4 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase1e-87324
NC_013209:2032500:2050328205032820519621635Acetobacter pasteurianus IFO 3283-01, complete genomeglucose-6-phosphate 1-dehydrogenase2e-85316
NC_017100:2035000:2052968205296820546021635Acetobacter pasteurianus IFO 3283-03, complete genomeglucose-6-phosphate 1-dehydrogenase2e-85316
NC_017108:2032500:2050305205030520519391635Acetobacter pasteurianus IFO 3283-12, complete genomeglucose-6-phosphate 1-dehydrogenase2e-85316
NC_017111:2032500:2050323205032320519571635Acetobacter pasteurianus IFO 3283-32, complete genomeglucose-6-phosphate 1-dehydrogenase2e-85316
NC_017121:2032500:2050310205031020519441635Acetobacter pasteurianus IFO 3283-07, complete genomeglucose-6-phosphate 1-dehydrogenase2e-85316
NC_017125:2035000:2052948205294820545821635Acetobacter pasteurianus IFO 3283-22, complete genomeglucose-6-phosphate 1-dehydrogenase2e-85316
NC_017146:2035000:2052990205299020546241635Acetobacter pasteurianus IFO 3283-26, complete genomeglucose-6-phosphate 1-dehydrogenase2e-85316
NC_017150:1940000:1958074195807419597081635Acetobacter pasteurianus IFO 3283-01-42C, complete genomeglucose-6-phosphate 1-dehydrogenase2e-85316
NC_015731:25493:4131241312427361425Nitrosomonas sp. Is79A3 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase3e-82306
NC_020050:413426:4188344188344202131380Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partialglucose-6-phosphate 1-dehydrogenase4e-81302
NC_010628:3675128:3679468367946836808441377Nostoc punctiforme PCC 73102, complete genomeglucose-6-phosphate 1-dehydrogenase1e-74280
NC_008595:1176658:1194419119441911958281410Mycobacterium avium 104, complete genomeglucose-6-phosphate 1-dehydrogenase8e-72271
NC_015312:3675148:3742503374250337439301428Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase1e-70268
NC_013722:2150882:2150882215088221523451464Xanthomonas albilineans, complete genomeputative glucose-6-phosphate 1-dehydrogenase protein1e-65251
NC_009380:1885024:1903506190350619050801575Salinispora tropica CNB-440 chromosome, complete genomeglucose-6-phosphate 1-dehydrogenase5e-63242
NC_017516:879834:911251911251912114864Neisseria meningitidis H44/76 chromosome, complete genomeglucose-6-phosphate dehydrogenase2e-59230
NC_017955:3006500:3024361302436130257971437Modestobacter marinus, complete genomeglucose-6-phosphate 1-dehydrogenase2e-55216
NC_010617:55493:5852258522599821461Kocuria rhizophila DC2201, complete genomeglucose-6-phosphate 1-dehydrogenase2e-47190
NC_015942:787808:798402798402799202801Acidithiobacillus ferrivorans SS3 chromosome, complete genome3e-30133
NC_012581:1075663:108015410801541080702549Bacillus anthracis str. CDC 684 chromosome, complete genomeglucose-6-phosphate dehydrogenase2e-22107
NC_015387:1002955:1002955100295510043601406Marinithermus hydrothermalis DSM 14884 chromosome, complete genome2e-1687.8