Pre_GI: BLASTP Hits

Some Help

Query: NC_015848:1647523:1646783 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1646783, End: 1647526, Length: 744

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:2764000:278595727859572786700744Mycobacterium tuberculosis KZN 4207 chromosome, complete genome6-phosphogluconolactonase devB8e-95346
NC_018524:5748421:575434157543415755087747Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome6-phosphogluconolactonase1e-39162
NC_016789:1334514:133717313371731337889717Corynebacterium diphtheriae PW8 chromosome, complete genome6-phosphogluconolactonase4e-35148
NC_002935:1315019:131767813176781318394717Corynebacterium diphtheriae NCTC 13129, complete genome6-phosphogluconolactonase7e-35147
NC_016783:1313008:131566713156671316383717Corynebacterium diphtheriae INCA 402 chromosome, complete genome6-phosphogluconolactonase7e-35147
NC_016785:1270295:127295412729541273670717Corynebacterium diphtheriae CDCE 8392 chromosome, complete genome6-phosphogluconolactonase7e-35147
NC_016787:1276983:128078612807861281502717Corynebacterium diphtheriae HC03 chromosome, complete genome6-phosphogluconolactonase7e-35147
NC_016788:1286974:129077712907771291493717Corynebacterium diphtheriae HC04 chromosome, complete genome6-phosphogluconolactonase7e-35147
NC_016799:1343020:134682313468231347539717Corynebacterium diphtheriae 31A chromosome, complete genome6-phosphogluconolactonase7e-35147
NC_016800:1317276:131993513199351320651717Corynebacterium diphtheriae BH8 chromosome, complete genome6-phosphogluconolactonase7e-35147
NC_016801:1333860:133649813364981337214717Corynebacterium diphtheriae C7 (beta) chromosome, complete genome6-phosphogluconolactonase7e-35147
NC_016802:1256287:129226712922671292983717Corynebacterium diphtheriae HC02 chromosome, complete genome6-phosphogluconolactonase7e-35147
NC_010475:953618:959175959175959933759Synechococcus sp. PCC 7002, complete genome6-phosphogluconolactonase4e-1891.7
NC_007413:5264463:528594852859485286670723Anabaena variabilis ATCC 29413, complete genome6-phosphogluconolactonase4e-1891.7
NC_011883:1314624:133136013313601332106747Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,6-phosphogluconolactonase4e-1685.1
NC_007498:1072112:108793410879341088632699Pelobacter carbinolicus DSM 2380, complete genome6-phosphogluconolactonase, glucosamine-6-phosphate isomerase/deaminase2e-1273.2
NC_014643:2056280:209797420979742098939966Rothia dentocariosa ATCC 17931 chromosome, complete genome6-phosphogluconolactonase4e-1271.6
NC_008510:1339926:136775913677591368430672Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Glucosamine-6-phosphate deaminase3e-1168.9
NC_015387:1002955:100232010023201002970651Marinithermus hydrothermalis DSM 14884 chromosome, complete genome6-phosphogluconolactonase5e-1064.7
NC_004663:1499145:151749915174991518188690Bacteroides thetaiotaomicron VPI-5482, complete genome6-phosphogluconolactonase1e-0860.1
NC_014933:3251000:325222132522213252937717Bacteroides helcogenes P 36-108 chromosome, complete genome6-phosphogluconolactonase2e-0756.2