Pre_GI: BLASTP Hits

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Query: NC_015848:1105892:1117212 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1117212, End: 1118189, Length: 978

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000909:762859:782858782858783841984Methanocaldococcus jannaschii DSM 2661, complete genomebifunctional short chain isoprenyl diphosphate synthase (idsA)6e-2098.2
NC_009515:1409912:146627614662761467268993Methanobrevibacter smithii ATCC 35061, complete genomebifunctional short chain isoprenyl diphosphate synthase, IdsA7e-1478.2
NC_013741:1304000:132428413242841325267984Archaeoglobus profundus DSM 5631, complete genomeDimethylallyltranstransferase1e-1170.9
NC_014471:163404:1679261679261689661041Ignisphaera aggregans DSM 17230 chromosome, complete genomeDimethylallyltranstransferase3e-1272.8
NC_008782:867344:887111887111888094984Acidovorax sp. JS42, complete genomeDimethylallyltranstransferase2e-0963.2
NC_015574:1541613:155130015513001552286987Methanobacterium sp. SWAN-1 chromosome, complete genomeDimethylallyltranstransferase6e-2098.6
NC_014374:318528:3281343281343291501017Acidilobus saccharovorans 345-15 chromosome, complete genomeFarnesylgeranyl diphosphate synthase2e-1273.6
NC_012726:1878503:189035018903501891345996Sulfolobus islandicus M.16.4 chromosome, complete genomefarnesyltranstransferase9e-1271.2
NC_017275:1909403:192125119212511922246996Sulfolobus islandicus HVE10/4 chromosome, complete genomefarnesyltranstransferase1e-1170.9
NC_013769:1993557:200540420054042006399996Sulfolobus islandicus L.D.8.5 chromosome, complete genomefarnesyltranstransferase9e-1271.2
NC_012588:1874242:188608918860891887084996Sulfolobus islandicus M.14.25 chromosome, complete genomefarnesyltranstransferase1e-1170.9
NC_015518:614806:619451619451620431981Acidianus hospitalis W1 chromosome, complete genomefarnesyltranstransferase2e-1067
NC_012589:2006323:201817020181702019165996Sulfolobus islandicus L.S.2.15, complete genomeFarnesyltranstransferase9e-1271.2
NC_012632:1980332:199218519921851993180996Sulfolobus islandicus M.16.27 chromosome, complete genomefarnesyltranstransferase1e-1170.9
NC_007908:1328832:136121913612191362202984Rhodoferax ferrireducens T118, complete genomeFarnesyltranstransferase6e-1168.6
NC_008344:811386:841237841237842205969Nitrosomonas eutropha C91, complete genomeFarnesyltranstransferase6e-1582
NC_012622:1944544:195639119563911957386996Sulfolobus islandicus Y.G.57.14 chromosome, complete genomefarnesyltranstransferase9e-1271.2
NC_012623:663020:668334668334669329996Sulfolobus islandicus Y.N.15.51 chromosome, complete genomefarnesyltranstransferase9e-1271.2
NC_017276:1772146:178399317839931784988996Sulfolobus islandicus REY15A chromosome, complete genomefarnesyltranstransferase1e-1170.9
NC_018876:863314:877396877396878361966Methanolobus psychrophilus R15 chromosome, complete genomefarnesyltranstransferase8e-0961.6
NC_003551:723901:735536735536736510975Methanopyrus kandleri AV19, complete genomeGeranylgeranyl pyrophosphate synthase1e-1584.3
NC_018678:554675:557114557114558088975Alteromonas macleodii str. 'English Channel 673' chromosome,geranylgeranyl pyrophosphate synthase6e-1582
NC_019977:1621939:162475016247501625715966Methanomethylovorans hollandica DSM 15978, complete genomegeranylgeranyl pyrophosphate synthase1e-1377.8
NC_020304:2107979:2123746212374621247741029Desulfocapsa sulfexigens DSM 10523, complete genomegeranylgeranyl pyrophosphate synthase9e-1478.2
NC_016616:134449:166372166372167340969Dechlorosoma suillum PS chromosome, complete genomegeranylgeranyl pyrophosphate synthase5e-1375.5
NC_007645:6049340:607702560770256077993969Hahella chejuensis KCTC 2396, complete genomeGeranylgeranyl pyrophosphate synthase2e-1170.1
NC_019977:828427:844786844786845685900Methanomethylovorans hollandica DSM 15978, complete genomegeranylgeranyl pyrophosphate synthase5e-0755.5
NC_014820:1618606:161860616186061619571966Cenarchaeum symbiosum A, complete genomegeranylgeranyl pyrophosphate synthase/geranyltranstransferase7e-1478.2
NC_007181:55685:694966949670488993Sulfolobus acidocaldarius DSM 639, complete genomegeranylgeranyl pyrophosphate synthetase6e-1065.1
NC_002754:46297:512075120752205999Sulfolobus solfataricus P2, complete genomeGeranylgeranyl pyrophosphate synthetase (gdS-1)4e-1479
NC_015435:120334:132275132275133258984Metallosphaera cuprina Ar-4 chromosome, complete genomegeranyltranstransferase3e-1273.2
NC_010804:450130:467728467728468723996Burkholderia multivorans ATCC 17616 chromosome 1, completeheptaprenyl diphosphate synthase2e-1067
NC_011725:1486635:149869814986981499660963Bacillus cereus B4264 chromosome, complete genomeheptaprenyl diphosphate synthase component II5e-1788.6
NC_011959:972798:9920129920129930161005Thermomicrobium roseum DSM 5159, complete genomeheptaprenyl diphosphate synthase component II1e-1377.4
NC_004668:3118500:313830931383093139295987Enterococcus faecalis V583, complete genomeheptaprenyl diphosphate synthase, component II, putative3e-1892.8
NC_003106:2060628:206717820671782068167990Sulfolobus tokodaii str. 7, complete genomehypothetical geranylgeranyl pyrophosphate synthetase8e-1271.2
NC_007681:979815:989514989514990497984Methanosphaera stadtmanae DSM 3091, complete genomeIdsA2e-21103
NC_012559:2854640:287946228794622880430969Laribacter hongkongensis HLHK9, complete genomeIspB5e-1685.5
NC_020195:285606:290051290051291028978Blattabacterium sp. (Blatta orientalis) str. Tarazona, completeoctaprenyl diphosphate synthase9e-1271.2
NC_013716:4885776:488577648857764886747972Citrobacter rodentium ICC168, complete genomeoctaprenyl-diphosphate synthase1e-20100
NC_018080:5192264:521827352182735219241969Pseudomonas aeruginosa DK2 chromosome, complete genomeoctaprenyl-diphosphate synthase1e-1790.5
NC_009883:871594:885181885181886164984Rickettsia bellii OSU 85-389, complete genomeOctaprenyl-diphosphate synthase1e-1687.8
NC_003919:3396136:341224834122483413246999Xanthomonas axonopodis pv. citri str. 306, complete genomeoctaprenyl-diphosphate synthase2e-1893.2
NC_009074:3409849:341340334134033414395993Burkholderia pseudomallei 668 chromosome I, complete sequenceoctaprenyl-diphosphate synthase3e-1169.3
NC_014909:86000:105536105536106510975Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeoctaprenyl-diphosphate synthase1e-1584.3
NC_017192:497950:506291506291507190900Arcobacter sp. L, complete genomeoctaprenyl-diphosphate synthase9e-1271.2
NC_007940:782207:7968007968007978041005Rickettsia bellii RML369-C, complete genomeOctaprenyl-diphosphate synthase1e-1687.8
NC_005061:96536:101185101185102159975Candidatus Blochmannia floridanus, complete genomeoctaprenyl-diphosphate synthase2e-1273.2
NC_015380:859424:8731288731288741441017Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomeoctaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate syn4e-1479
NC_014774:171500:171502171502172470969Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeoctaprenyl-diphosphate synthase protein2e-1170.5
NC_014532:349384:3610403610403620411002Halomonas elongata DSM 2581, complete genomeoctylprenyl diphosphate synthase7e-1581.6
NC_008463:5364428:538933053893305390298969Pseudomonas aeruginosa UCBPP-PA14, complete genomeoctylprenyl diphosphate synthase1e-1790.5
NC_016582:11535695:1155335211553352115543651014Streptomyces bingchenggensis BCW-1 chromosome, complete genomepolyprenyl diphosphate synthase1e-0654.3
NC_012943:3299744:330458533045853305562978Mycobacterium tuberculosis KZN 1435 chromosome, complete genomepolyprenyl synthetase3e-159561
NC_015589:1630461:164634516463451647307963Desulfotomaculum ruminis DSM 2154 chromosome, complete genomePolyprenyl synthetase6e-27121
NC_013887:1287783:128914612891461290099954Methanocaldococcus sp. FS406-22 chromosome, complete genomePolyprenyl synthetase2e-1996.7
NC_002950:2068500:208724120872412088119879Porphyromonas gingivalis W83, complete genomepolyprenyl synthetase3e-1376.3
NC_015931:857327:868166868166869158993Pyrolobus fumarii 1A, complete genomepolyprenyl synthetase2e-1273.2
NC_015697:116000:137169137169138149981Lactobacillus reuteri SD2112 chromosome, complete genomepolyprenyl synthetase4e-1169.3
NC_010084:3051355:305605030560503057045996Burkholderia multivorans ATCC 17616 chromosome 1, completepolyprenyl synthetase2e-1067
NC_012943:3777371:3791949379194937930011053Mycobacterium tuberculosis KZN 1435 chromosome, complete genomepolyprenyl synthetase1e-0860.8
NC_013947:2113941:2118202211820221193081107Stackebrandtia nassauensis DSM 44728 chromosome, complete genomePolyprenyl synthetase3e-0859.7
NC_002755:1095105:1106444110644411074451002Mycobacterium tuberculosis CDC1551, complete genomepolyprenyl synthetase4e-158557
NC_014507:758820:776197776197777162966Methanoplanus petrolearius DSM 11571 chromosome, complete genomepolyprenyl synthetase5e-1582
NC_014910:966761:9828779828779839261050Alicycliphilus denitrificans BC chromosome, complete genomepolyprenyl synthetase1e-0964.3
NC_013422:1755875:180168718016871802616930Halothiobacillus neapolitanus c2, complete genomePolyprenyl synthetase7e-0755.1
NC_008553:329458:348426348426349295870Methanosaeta thermophila PT, complete genomePolyprenyl synthetase6e-0652
NC_002755:3773734:3788312378831237893761065Mycobacterium tuberculosis CDC1551, complete genomepolyprenyl synthetase1e-0860.8
NC_014219:2491021:249102124910212491914894Bacillus selenitireducens MLS10 chromosome, complete genomePolyprenyl synthetase2e-0653.9
NC_017026:1095753:110709211070921108069978Mycobacterium tuberculosis RGTB327 chromosome, complete genomepolyprenyl synthetase3e-159561
NC_014758:579741:584574584574585545972Calditerrivibrio nitroreducens DSM 19672 chromosome, completepolyprenyl synthetase4e-23108
NC_008555:2597980:261984426198442620824981Listeria welshimeri serovar 6b str. SLCC5334, complete genomepolyprenyl synthetase3e-1995.9
NC_014122:685701:707759707759708712954Methanocaldococcus infernus ME chromosome, complete genomePolyprenyl synthetase1e-1584.3
NC_011979:1683964:169068416906841691652969Geobacter sp. FRC-32, complete genomePolyprenyl synthetase5e-1375.5
NC_017026:3754000:376668937666893767645957Mycobacterium tuberculosis RGTB327 chromosome, complete genomepolyprenyl synthetase1e-0653.9
NC_009727:1678568:167856816785681679566999Coxiella burnetii Dugway 7E9-12, complete genomepolyprenyl synthetase family protein5e-1685.1
NC_002945:3735141:3749720374972037507721053Mycobacterium bovis AF2122/97, complete genomepolyprenyl synthetase IdsB1e-0860.8
NC_016768:3774105:3788683378868337897351053Mycobacterium tuberculosis KZN 4207 chromosome, complete genomepolyprenyl synthetase idsB1e-0860.8
NC_009565:3793976:3808554380855438096061053Mycobacterium tuberculosis F11, complete genomepolyprenyl synthetase idsB1e-0860.8
NC_002945:1095337:110685611068561107833978Mycobacterium bovis AF2122/97, complete genomepolyprenyl-diphosphate synthase3e-159561
NC_016768:3296478:330131933013193302296978Mycobacterium tuberculosis KZN 4207 chromosome, complete genomepolyprenyl-diphosphate synthase grcC23e-159561
NC_009565:1098847:111017311101731111150978Mycobacterium tuberculosis F11, complete genomepolyprenyl-diphosphate synthase grcC23e-159561
NC_009525:1096386:110771311077131108690978Mycobacterium tuberculosis H37Ra, complete genomepolyprenyl-diphosphate synthase GrcC25e-159560
NC_000962:3781501:3797437379743737984891053Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE) (POLYPRENYL DIPHOSPHATE SYNTHASE)6e-0962
NC_012115:691154:710514710514711377864Nautilia profundicola AmH, complete genomeprenyl transferase6e-0755.1
NC_000962:1095078:110640511064051107382978Mycobacterium tuberculosis H37Rv, complete genomePROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL PYROPHOSPHATE SYNTHETASE)5e-159560
NC_010170:4463000:4468177446817744692141038Bordetella petrii, complete genomeputative octaprenyl-diphosphate synthase3e-1789.4
NC_015571:260664:278322278322279296975Porphyromonas gingivalis TDC60, complete genomeputative polyprenyl synthetase8e-1478.2
NC_010729:2147268:216593521659352166909975Porphyromonas gingivalis ATCC 33277, complete genomeputative polyprenyl synthetase2e-1377
NC_016804:3753243:3763009376300937640611053Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative polyprenyl synthetase1e-0860.8
NC_012207:3766978:3781557378155737826091053Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative polyprenyl synthetase1e-0860.8
NC_009525:3794000:3806560380656038076121053Mycobacterium tuberculosis H37Ra, complete genomeputative polyprenyl synthetase IdsB6e-0962
NC_008769:3769065:3783644378364437846961053Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative polyprenyl synthetase idsB1e-0860.8
NC_015848:3851230:3865810386581038668621053Mycobacterium canettii CIPT 140010059, complete genomeputative polyprenyl synthetase IDSB1e-0860.5
NC_018681:5490963:5501354550135455023911038Nocardia brasiliensis ATCC 700358 chromosome, complete genomeputative polyprenyl synthetase IDSB6e-1168.6
NC_019950:3818000:382920138292013830154954Mycobacterium canettii CIPT 140060008 complete genomePutative polyprenyl synthetase IdsB (polyprenyl transferase) (polyprenyl diphosphate synthase)1e-0860.8
NC_012207:1097228:110855511085551109532978Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative polyprenyl-diphosphate synthase3e-159561
NC_016804:1095846:110717311071731108150978Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative polyprenyl-diphosphate synthase3e-159561
NC_008769:1125567:113689411368941137871978Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative polyprenyl-diphosphate synthase grcC23e-159561
NC_019673:967559:974914974914975897984Saccharothrix espanaensis DSM 44229 complete genomeputative trans-hexaprenyltranstransferase2e-0963.5
NC_005125:760721:803020803020803997978Gloeobacter violaceus PCC 7421, complete genomesolanesyl diphosphate synthase2e-1479.7
NC_017186:529024:5411775411775422291053Amycolatopsis mediterranei S699 chromosome, complete genometrans-hexaprenyltranstransferase5e-51201
NC_015682:150808:173406173406174392987Thermodesulfobacterium sp. OPB45 chromosome, complete genometrans-hexaprenyltranstransferase2e-1479.7
NC_015422:910292:9281399281399291881050Alicycliphilus denitrificans K601 chromosome, complete genometrans-hexaprenyltranstransferase1e-0963.9
NC_006087:177375:1773751773751784361062Leifsonia xyli subsp. xyli str. CTCB07, complete genometrans-hexaprenyltranstransferase2e-28127
NC_015437:918614:933928933928934902975Selenomonas sputigena ATCC 35185 chromosome, complete genomeTrans-hexaprenyltranstransferase2e-1996.7
NC_013132:8732093:875318287531828754147966Chitinophaga pinensis DSM 2588, complete genomeTrans-hexaprenyltranstransferase9e-1891.3
NC_007484:3429140:3429140342914034301771038Nitrosococcus oceani ATCC 19707, complete genomeTrans-hexaprenyltranstransferase2e-1480.1
NC_015144:2053969:205530220553022056279978Weeksella virosa DSM 16922 chromosome, complete genometrans-hexaprenyltranstransferase2e-1376.6
NC_013595:606096:607661607661608656996Streptosporangium roseum DSM 43021, complete genomeTrans-hexaprenyltranstransferase2e-46186
NC_007644:1293701:129370112937011294669969Moorella thermoacetica ATCC 39073, complete genomeTrans-hexaprenyltranstransferase2e-22106
NC_012880:3915500:393438239343823935353972Dickeya dadantii Ech703, complete genomeTrans-hexaprenyltranstransferase1e-1894.4
NC_009012:686740:690963690963691919957Clostridium thermocellum ATCC 27405, complete genomeTrans-hexaprenyltranstransferase6e-1892
NC_014318:529010:5411635411635422151053Amycolatopsis mediterranei U32 chromosome, complete genometrans-hexaprenyltranstransferase5e-51201
NC_017316:2637707:266096826609682661954987Enterococcus faecalis OG1RF chromosome, complete genometrans-hexaprenyltranstransferase3e-1892.4